KEGG   Borreliella garinii NMJW1: BgCN_0869
Entry
BgCN_0869         CDS       T02299                                 
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
bgn  Borreliella garinii NMJW1
Pathway
bgn03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bgn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    BgCN_0869
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bgn03400]
    BgCN_0869
DNA repair and recombination proteins [BR:bgn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BgCN_0869
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      BgCN_0869
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_29 AAA_16 AAA_21 RsgA_GTPase nSTAND3 nSTAND1 AAA_15 AAA_23 AAA_22 AAA_25 NACHT AAA_33 cobW SLFN-g3_helicase Viral_helicase1 DnaJ_CXXCXGXG
Other DBs
NCBI-GeneID: 13813055
NCBI-ProteinID: AFT84144
Position
889666..892518
AA seq 950 aa
MIKNLEKKIIVRGAKEHNLKNIDIDIPKDGLVVISGKSGSGKSSLAFDTIFAEGQRRYME
SVSAYARQFLGVMKKPNVDYIDGLSPSIAIEQRAIGNNPRSTVGTITEIYDYYRLIFAKI
GKAYCPNDGRLIEEQSLDKIVNTILSYAEGSKVILFAPIVRGSKGSHKKVLEKILNQGFN
RVRINSEDYLIEDALNLNLHKNKKHTIEIIVDRIKLGNNVRVRLAESIETSLAVSNGYLR
VEIENDLEKIDKFFTEHNSCPLCGFSLPFIEPRLFSFNSPFGACSECSGLGVTLEFDFES
ICPDTSLSFNDDAFITFKTSSSWSVAIFKGLAKHYNFELNTPVKDIPSKVLKQILYGANE
KIDFIYQSKEMEAREMDGGFHYSKKFEGLLPLLKRRYLTTESESTKIFYENLMSKKICNS
CKGKRLCTGALAVKINGRDIQDLSNLSVFDSYMFFENLQLDAVDEKISKEILKEIKSRLK
FLIDVGLSYLYLNRISGSLSGGEAQRIRLATQIGSALSGVIYVLDEPSIGLHQRDNEKLI
STLVNLKNLGNTVIVVEHDEQTLRTADYIIDMGPGAGILGGEIVAKGALIDILNSKNSLT
GQYLSGKFKIDVPSSRRKTDKGEILLLGSNKNNLKNIDVSIPLGVFTVITGVSGSGKSTL
LNEVLYPALDSRLKLDEKYCDGFKDIIGYEKIDKIIQINQKPIGRTSRSNPATYVGFFTE
IRELFAKLPDAKSRGFKAGRFSFNVKGGRCEKCQGDGYLNIQMHFLPDVFIPCDLCKGKK
FNEETLEVRYKGKNIHDVLEMSVFEAKNFFENVPKVSHYLKFLIEVGLEYIKLGQSATTL
SGGEAQRIKLAFELSKKSTGKTFYIVDEPTTGLHFDDIKKLLEVLQRLVSNGNTVVLIEH
NLDVIKQADYIIDLGPDGGLAGGNIVVSGVPEEVAKCENSYTGMFLKNLL
NT seq 2853 nt   +upstreamnt  +downstreamnt
ttgataaaaaatttggaaaaaaaaattatcgtcaggggagcaaaagaacataatttaaaa
aatattgatatagatattccaaaagatggtttagttgtaatatctggcaagagcggctct
ggtaaatcttctctagcttttgatactatttttgcagaagggcaaagaaggtatatggag
tctgtttcagcttatgcaaggcaatttttgggtgtaatgaaaaaacccaatgttgattat
atagatggactttctccttctatagctattgagcagagagcaataggcaataatcctcgc
tctactgttggaacaattactgaaatttatgattattatagactaatatttgctaaaata
ggtaaagcatactgtccaaatgatggtagattaatagaagagcaatctttagataaaata
gttaatactattttaagttatgccgaaggatctaaagttatactttttgcaccaattgta
aggggctctaaaggttctcataaaaaggttttagaaaaaatattaaatcaagggttcaat
agagtcagaataaattctgaagattatttaatagaagatgcacttaatttaaatttacat
aaaaataaaaaacataccattgaaattatagttgatagaatcaagcttggtaataatgtt
cgagttagacttgcagaatctattgaaacctctcttgctgtttctaatgggtatttacga
gtggagattgagaatgatttagaaaaaatagataagttttttacagagcataatagttgt
cctttatgtggattttcgcttccttttatagagcccaggcttttttcatttaatagtcca
tttggtgcttgcagtgagtgctctggtcttggtgttacacttgagtttgattttgagagt
atttgtcctgatacaagtctttcttttaatgatgatgcttttattacttttaagacaagc
tcatcttggtctgtggctatttttaaaggacttgctaagcattataattttgaattaaat
acccctgtaaaagacattccaagcaaagttcttaaacagattttatacggagcaaatgaa
aaaatagattttatttatcagtccaaagaaatggaagcaagggagatggatggaggattt
cattattccaaaaagtttgaagggcttttacctcttttaaaaagacgatatcttacaaca
gaatcagagagtactaaaattttttacgaaaatttgatgtctaaaaaaatctgtaattca
tgtaaggggaagcggttatgcactggagctttagctgtgaaaatcaatgggagagatatt
caagatcttagcaatttatctgtatttgattcttatatgttttttgaaaacttacagctt
gatgcggtggatgaaaaaatatctaaagaaattttaaaggaaattaaaagtaggcttaaa
tttttaattgatgttggtctttcttatttgtatttaaatagaatatcgggcagtctatct
gggggtgaggctcagcgtattaggcttgctactcaaataggatcagcactttcaggcgtt
atttatgttcttgatgagccaagtattggtcttcatcaaagagataacgaaaaattaatc
tctactcttgttaatcttaaaaatcttggcaatactgtaattgttgttgagcacgacgag
caaactttgcgtactgcagactatattattgatatgggtcctggtgccggaattcttgga
ggagaaatagttgcaaagggagccttaattgatattttaaatagcaaaaacagtttaact
ggtcagtatttgagcggcaagtttaaaatagatgttccaagctctagaagaaaaacagat
aagggagaaattttgcttttaggctctaataaaaacaatcttaaaaatatagatgtaagt
atccctttgggagttttcactgtaataacaggtgtttctggtagtggaaaaagtactttg
cttaacgaagtgttatatccagctcttgatagcagattaaagcttgatgaaaagtattgt
gatgggtttaaagacattattggatacgaaaaaatagataaaattattcaaataaatcaa
aaaccaataggaagaacttcaagatcaaacccagcaacttatgttggattttttacagaa
attagggagctttttgctaagcttccagatgcaaaatcaagaggttttaaagccggtaga
ttttcttttaatgttaaaggcggaagatgtgagaaatgccaaggagatgggtatctcaac
attcaaatgcattttttaccagatgtttttattccttgtgatttatgcaagggtaaaaaa
tttaatgaagaaactttagaggttaggtataaaggaaaaaatatacatgatgttttagag
atgagtgtatttgaagctaaaaatttttttgagaatgttcccaaagttagtcattatttg
aaatttttaattgaagttgggcttgaatacatcaaattgggacaatctgcaacaacttta
tcaggaggcgaagctcaacgtattaagttggcttttgagctaagtaagaagagcacaggt
aaaaccttttacatcgtcgatgaaccaacaaccggattgcattttgatgacataaagaag
ttgttagaagttttgcagcggttagtttctaatggtaatacagttgtactcatagagcat
aatttagatgtaattaagcaagcagattatataatagatttgggtcccgatggtggattg
gcaggggggaatatcgttgtttctggtgttcccgaagaggttgcaaaatgcgagaattcc
tatacgggaatgtttttaaaaaatcttttgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein domain (20)   
   Pfam (20)   
All databases (28)   

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