KEGG   Burkholderia gladioli ATCC 10248: BM43_5662
Entry
BM43_5662         CDS       T03826                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
bgo  Burkholderia gladioli ATCC 10248
Pathway
bgo03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bgo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    BM43_5662 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bgo03400]
    BM43_5662 (uvrA)
DNA repair and recombination proteins [BR:bgo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BM43_5662 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      BM43_5662 (uvrA)
SSDB
Motif
Pfam: ABC_tran UvrA_inter AAA_29 AAA_21 SMC_N AAA_16 nSTAND1 RsgA_GTPase AAA_22 AAA_23 NACHT AAA_25 AAA_18 AAA_33 UvrA_DNA-bind nSTAND3 Viral_helicase1 ATPase DnaJ_CXXCXGXG SbcC_Walker_B DUF4350 Anti-TRAP RNA12 DUF87
Other DBs
NCBI-ProteinID: AJW97013
Position
2:complement(1955956..1961826)
AA seq 1956 aa
MSSSHLIRIRGARQHNLKNVDLDLRTGEMTVVTGPSGSGKSSLVFDTLYAEGQRRYVETF
SAYARQFLDRMDRPQVDRVDGVPPAIAIDQTNPVRSSRSTVGTMTELNDHLKLLYARAAE
LFDRKTAQPVRHDTPETIYAELAARTAGEDPRLVVTFPVELPEAVTAEEVEQWLSASGYT
RVQAQREVVSEAGTRKVLDVVADRFRLQHTEKARVVEAIEASLRRGAGRVNVYVLAPAPE
NANEAAPEPQVWRFSTGLHHPDSDLRYAEPQAALFSFNSAYGACETCRGFGRVIGVDLGL
VIPDARKTLREGAIKPMQTPAWKECQDDLMRYAERAKIRRGTPWGELTDAERDWVINGSP
DWDGKWQTQWYGVKRFFGYLESKAYKMHIRVLLSKYRSYTPCEVCGGARLKTESLLWRLG
SKADADAVLAPAARFMPRGVDWNRAQLEALPGLTVHDLMLLPIERIRRFFDGISLPSALL
DDALKLLLAEVRTRLKYLCDVGLGYLTLDRQSRTLSGGEVQRINLTTALGTSLTKTLFVL
DEPSIGLHPRDLNRIVEAMQRLRDAGNTLVVVEHDPSVMLAADRLIDMGPGPGERGGSIV
YDGTPGEIRSADTLTGAYLGGRREVAHASQWSRRAVDASTPRLVLEGASEHNLRDVTVEI
PLQRLVCLTGVSGSGKSTLLQDVLYPAMARHMGKATEAPGAFRRLAGADQVSDVVFVDQS
PIGKTTRSNPASYVGAFDEIRKLFAKAPLALQRGYGAGMFSFNTGEGRCPTCGGSGFEHV
EMQFLSDVYLRCPDCDGQRYRPEILEVRIERGGRLLNVAEVLDLTVSEAAAFFAGDAEVL
RVLQPIVDVGLEYVKLGQPVPTLSGGEAQRLKLAGFLAESAAAGSARGKAAKAASAERLF
MFDEPTTGLHFDDIAKLMQAFGKLLASGHSLIVIEHNLDVIRAADWLIDLGPEGGDGGGL
VLCAGTPEDVKACAGSHTGAALAQYERAMAAEAELAEHGVPLQAKLNAVRERRAIEGEDV
VRIVNAREHNLKSLDVDIPHGKFNVITGVSGSGKSTLAFDILFHEGQRRYLESLNAYARS
IVQPAGRPEVDAVYGIPPTVAIEQRLSRGGRKSTVATTSEVWHFLRLLYVKLGLQHCIHD
GTPVTSQTVESIAAQLLRDHRGQHVGLLAPLVVNRKGVYTDLAKWAKARGNSHLRVDGEF
VPVDPWPKLDRFREHTIELPVADLVVSPDNEAELRRRLDETLEIGKGVLHLLAPLDGLGE
ALAGRGATARIGQTKVLSVKRACPVCGTSYPELDPRMFSYNSKHGWCTTCVGTGLALTRE
QRAAYDDTVLGAEDGRGREQTLPSEEQEPEGLGDQPCPDCHGTRLNPSARAVTFDAHSIV
EVAQWTVSQTREWIDALRLEGRDAQIARDIVSEIGSRLAFLEEVGLGYLSLDRAAPSLSG
GEAQRIRLAAQLGSNLQGVCYVLDEPTIGLHPRDNQILLNALRKLGDKGNTLVVVEHDED
TIRRADHVIDVGPGAGKRGGTVVAQGGVADLSAQSASLTGRYLAEPIVHPLQSRRSVVPP
GRKGAQAVPEQWLTVHGGKLHNLREVTVGIPLARLVAVTGVSGSGKSTLARDVLMANLLD
AVGRSVLSSPATRRARKAAGQDAAPAGRRGSVLARSAPRPSLNVTHAWQGCESITGWESI
DRVLEVDQTPIGKTPRSCPATYIGVWDTIRKLFADTLEARARGYTASRFSFNTGDGRCPA
CEGQGVRTIGMSFLPDVKVPCDVCHGQRFNPETLAVSWRGRNIGEVLTMEIDEAVEFFAP
ISNIAHPLQLMKDVGLGYLTLGQPSPTLSGGEAQRIKLVTELSKVRDDITRRGQKAPHTL
YVLDEPTVGLHMADVAKLIRVLHRLVDGGHSVVVIEHDLDVIAEADWIIDLGPEGGTGGG
AIVAAAAPEALARVAASHTGQALVPVLARGGVTAEA
NT seq 5871 nt   +upstreamnt  +downstreamnt
ttgtcatccagccatctgatccgcattcgcggagcacgccagcacaatctcaagaatgtc
gatctcgacctgcgcaccggcgagatgacggtcgtgaccggtccgtcggggtcgggcaag
tcgagcctggtgttcgacacgctctatgccgagggccagcgccgctacgtcgagaccttc
agcgcctatgcgcggcagttcctggaccgcatggaccgcccccaggtggaccgcgtggac
ggcgtgccgcccgcgatcgcgatcgaccagaccaacccggtgcgcagctcgcgctcgacg
gtcggcaccatgaccgagctgaacgaccacctgaagctgctctacgcgcgcgcggccgag
ctgttcgaccgcaagaccgcgcagccggtgcggcatgacacgcccgagacgatctacgcc
gagctggccgcgcgcacggccggcgaggacccgcgcctggtggtgaccttcccggtcgag
ctgcccgaggcggtgacggccgaggaggtcgagcagtggctgtcggcgagcggctacacg
cgcgtgcaggcgcagcgcgaggtggtgtccgaggcgggcacgcgcaaggtgctcgacgtg
gtggccgaccgcttccgcctgcagcacacggagaaggcgcgcgtggtcgaggcgatcgag
gcatcgctcaggcgcggcgccggccgcgtcaacgtctacgtgctggcgccggcccccgag
aacgccaacgaggccgcgcccgagccgcaggtctggcgcttctccaccggcctgcaccat
cccgacagcgacctgcgctatgccgagccgcaggcggcgctgttctcgttcaactcggcc
tatggcgcctgcgagacctgccgcggtttcggccgcgtgatcggcgtcgacctgggcctg
gtgattcccgacgcgcgcaagacgctgcgagagggcgcgatcaagccgatgcagacgccg
gcctggaaggagtgccaggacgacctgatgcgctatgccgagcgcgcgaagatccgccgc
ggcacgccctggggcgagctcacggatgccgagcgcgactgggtgatcaacggctcgccc
gactgggacggcaagtggcagacccagtggtacggcgtgaagcgcttcttcggctatctg
gagtcgaaggcctacaagatgcacatccgcgtgctgctctcgaagtaccgcagttacacg
ccctgcgaagtctgcggcggcgcgcgcctgaagaccgaatcgctgctgtggcggctcggc
tcgaaggccgacgccgacgcggtgctggcgccggccgcgcgcttcatgccgcgcggcgtc
gactggaaccgcgcccagctggaggcgctgccgggcctgaccgtgcacgacctgatgctg
ctgccgatcgagcggatccgccgtttcttcgacggcatcagtctgcccagcgcgctgctc
gacgatgcgctcaagctgctgctggccgaggtgcgcacgcgcctgaaatacctctgcgac
gtcggcctcggctacctgacgctggaccgccagagccgcaccctgtcgggcggcgaggtg
cagcgcatcaacctgaccaccgcgctgggcacctcgctgaccaagaccctgttcgtgctc
gacgagcccagcatcggcctgcatccgcgcgacctgaaccgcatcgtcgaggccatgcag
cggctgcgcgacgccggcaacacgctggtggtggtcgagcacgatccctcggtgatgctg
gccgccgatcgcctgatcgacatgggccccggccccggcgagcgcggcggcagcatcgtc
tacgacggcacgcccggcgagatccgctcggccgacacgctgaccggcgcctacctgggc
ggccgccgcgaggtggcgcatgcctcgcaatggtcgcgccgcgcggtggacgcgagcacg
ccgcggctggtgctggaaggcgccagcgagcacaacctgcgcgacgtcacggtcgagatc
ccgctgcagcgactggtctgcctgaccggcgtgtcgggctcgggcaagtcgaccctgctg
caggacgtgctctatccggcgatggcgcgccacatgggcaaggccaccgaggcgccgggc
gcgttccggcgcctggccggcgccgaccaggtcagcgacgtggtgttcgtcgaccaatcg
ccgatcggcaagaccacccgctcgaacccggccagctacgtgggcgccttcgacgagatc
cgcaagctgttcgcgaaggcgccgctggcgctgcagcgcggctacggcgccggcatgttc
agcttcaacaccggcgaggggcgttgcccgacctgcggcggctccggcttcgagcacgtc
gagatgcagttcctcagcgacgtctacctgcgctgtcccgattgcgacggccagcgttat
cgccccgagatcctggaggtgcgcatcgagcgcggcggccgtttgctcaacgtggccgag
gtgctggacctgaccgtcagcgaggcggcggccttcttcgccggcgacgccgaggtgctg
cgcgtgctgcagccgatcgtcgacgtcgggctcgaatacgtgaagctgggccagccggtg
ccgaccctgtcgggcggcgaggcccagcgcctgaagctggccggcttcctggccgaatcg
gcggcggcgggcagcgcgcgcggcaaggcggccaaggcggcgagcgccgagcgcctgttc
atgttcgacgagcccaccaccgggctgcacttcgacgacatcgccaagctcatgcaggcc
ttcggcaagctgctggcgagcggccattcgctgatcgtgatcgagcacaacctggacgtg
atccgcgccgccgactggctgatcgacctgggcccggaaggcggcgacggcggcggcctg
gtgctgtgcgccggcacccccgaggacgtcaaggcctgcgccggctcgcataccggcgcg
gcgctggcgcagtacgagcgcgccatggccgccgaggcggagcttgccgagcacggcgtg
ccgctgcaggccaagctcaacgcggtgcgcgagcggcgcgccatcgagggcgaggacgtg
gtgcgcatcgtcaacgcgcgcgagcacaacctgaagtcgctcgacgtcgacatcccgcat
ggcaagttcaacgtgatcaccggcgtgtccggctcgggcaagtcgacgctggccttcgac
atcctgttccatgaagggcagcgccgctacctcgaatcgctgaacgcctacgcgcgctcg
atcgtgcagccggccgggcgccccgaggtggatgccgtgtacggcatcccgcccaccgtg
gcgatcgagcagcgcctgtcgcgcggcggccgcaagagcacggtggccaccacctccgag
gtctggcacttcctgcgcctgctgtacgtgaagctgggcctgcagcactgcatccacgac
ggcacgccggtcacctcgcagacggtggagtcgatcgccgcgcaactgctgcgcgaccat
cgcggccagcacgtcgggctgctcgcgccgctggtggtcaaccgcaagggcgtctatacc
gacctggccaagtgggccaaggcgcgcggcaactcgcacctgcgcgtggacggcgaattc
gtgccggtcgacccctggcccaagctcgaccgcttccgcgagcacaccatcgagctgccg
gtggccgacctggtggtgtcgcccgacaacgaggccgagctgcgccgccgcctggacgag
acactcgagatcggcaagggcgtgctgcacctgctcgcgccgctcgacggcctgggcgag
gcgctggccgggcgcggggcgaccgcgcggatcggccagaccaaggtgctgtcggtcaag
cgcgcctgcccggtgtgcggcaccagctatcccgagctggacccgcgcatgttctcgtac
aacagcaagcatggctggtgcaccacctgcgtgggcacgggcctggcgctcacgcgcgag
cagcgcgccgcctacgacgacacggtgctgggcgccgaggacggccgcggccgcgagcag
accctgccctccgaggagcaggaaccggaaggcctgggcgaccagccctgcccggattgc
catggcacgcgcctgaatccctcggcgcgcgcagtcaccttcgacgcgcactcgatcgtc
gaggttgcgcaatggaccgtctcgcagacgcgcgagtggatcgacgcgctgcggctcgag
gggcgcgacgcgcagatcgcgcgcgacatcgtcagcgagatcggcagccgcctggccttc
ctggaggaggtcgggctcggctacctgagcctggaccgcgccgcgcccagcctgtcgggc
ggcgaggcgcagcgcatccggctggccgcgcagctcggcagcaacctgcagggcgtctgc
tacgtgctcgacgagccgaccatcggcctgcacccgcgcgacaaccagatcctgctgaac
gcgctgcgcaagctcggcgacaagggcaatacgctggtggtggtcgagcacgacgaggac
accatccgccgcgccgatcacgtgatcgacgtcggccccggcgccggcaagcgcggcggc
acggtggtcgcgcagggcggcgtggccgacctgtccgcgcaatcggcctcgctgaccggc
cgctacctggccgagccgatcgtgcatccgctgcagtcgcgccgcagcgtggtgccgccg
ggccgcaagggcgcgcaggcggtgccggagcaatggctgaccgtgcatggcggcaagctg
cacaatctgcgcgaggtcacggtggggattccgctggcgcggctggtggcggtgacgggc
gtgagcggctcgggcaagtccaccttggcgcgcgacgtgctgatggccaacctgctcgac
gcggtggggcgctcggtgctgtcctcgccggccacgcgccgcgcgcgcaaggccgccggc
caggacgcggcgccggccggccgccgcggcagtgtgctggcgcgcagcgcgccgcggccc
tcgctgaacgtcacgcatgcctggcagggctgcgagtcgatcaccggctgggagtcgatc
gaccgcgtgctggaggtcgaccagacgccgatcggcaagacgccgcgttcctgcccggcc
acctacatcggcgtgtgggacaccatccgcaagctgttcgccgacacgctggaggcccgc
gcgcgcggctacaccgcctcgcgcttctccttcaacaccggcgacgggcgttgcccggcc
tgcgaggggcagggcgtgcgcaccatcggcatgagcttcctgcccgacgtgaaggtgccc
tgcgacgtgtgccacgggcagcgcttcaatcccgagacgctggccgtcagctggcgcggg
cgcaacatcggcgaggtgctgaccatggagatcgacgaggcggtggagttcttcgcgccg
atctcgaacatcgcccatccgctgcagctgatgaaggacgtcgggctcggctacctgacg
ctgggccagccctcgccgacgctgtcgggcggcgaggcgcagcgcatcaagctggtcacc
gagctgagcaaggtgcgcgacgacatcacccggcgcgggcagaaggcgccgcacacgctc
tacgtgctcgacgagcccaccgtcggcctgcacatggccgacgtggccaagctgatccgc
gtgctgcaccggctggtggacggcgggcacagcgtggtggtgatcgagcacgacctcgac
gtgatcgccgaggccgactggatcatcgacctcgggccggaaggcggcacgggcggcggc
gcgatcgtggcggcggcggcgccggaagcgctggcgcgcgtggcggccagccataccggg
caggcgctggtgccggtgctggcgcgcgggggtgtgacggccgaagcttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (24)   
   Pfam (24)   
All databases (31)   

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