KEGG T00922: Bgr

Bartonella grahamii: Bgr_11150

Entry

Bgr_11150         CDS       T00922

Symbol

topA

Name

(GenBank) DNA topoisomerase I

K03168

DNA topoisomerase I [EC:5.6.2.1]

Organism

bgr Bartonella grahamii

Brite

KEGG Orthology (KO) [BR:bgr00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bgr03032]
    Bgr_11150 (topA)
   03400 DNA repair and recombination proteins [BR:bgr03400]
    Bgr_11150 (topA)
Enzymes [BR:bgr01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     Bgr_11150 (topA)
DNA replication proteins [BR:bgr03032]
Prokaryotic type
  DNA Topoisomerases
   Bgr_11150 (topA)
DNA repair and recombination proteins [BR:bgr03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      Bgr_11150 (topA)

SSDB

Motif

Pfam:

Topoisom_bac Toprim_C_rpt Toprim zf-C4_Topoisom Toprim_4

Other DBs

NCBI-ProteinID:

ACS51373

UniProt:

C6ADW8

Position

1257782..1260355

AA seq 857 aa
MNIVIVESPAKAKTINKYLGSQYKVVASFGHVRDLPAKDGSVLPDRDFSMKWDIDSSAAK
RLNEIAKAVKEADSLILATDPDREGEAISWHILDVLRQKKVLKDKPIKRVVFNAITKKSV
LDAMNNPRDIDTSLVDAYLARRALDYLVGFTLSPVLWRKLPGARSAGRVQSVALRIICDR
ESEIEHFIKEDYWSVTTQLKTIRNDSFQARLTMFNQRKIGKLDIQSQEQADQIRFMLEKS
QYHTLSVEAKPTKRNPLPPFTTSTLQQAASSKLGFSASRTMQIAQKLYEGIEINGETAGL
ITYMRTDGVQIAPEAIDSARKVIHETFGKDYIPEKPRFYSTKAKNAQEAHEAIRPTDFQR
NPSQVRNFLDSDQAKLYELIWKRAIASQMRSAEIERTTVEIEAQQGENRANLRATGSVIR
FDGFISVYTDQRDEENNEENETTRLPQVNTGEALTKEKVESVQHTTEPPSRYSEASLIKK
LEELGIGRPSTYASTLATLCDRGYIVIDKRKLIPDAKGRIVTAFLENFFNRYVEYGFTAD
LEEKLDLISDGKLSWKDVLRDFWDGFNASISNIQELRITNVLDVLNVTLAPLAFPEREDG
SDVRSCPLCKNGQLSLKLGRYGAFVGCSNYPECKYTHQLGTDTGEENEAVRNDEPVILGI
DPETGKDISLRNGRFGPYIQLGESKEVKRAGLPKEWQAENVTLDKALALLSLPREIGVHP
ESGKTITATIGRYGPYLSHNGKSARLLHADEVFDIGINRAVTVLAEQQENKTKQSRATPA
ALAILGEHPEGGTITVRNGRYGPYVNWGKINATLPKDKDPISVTLPEALELISAKASSKK
TTSKRASSKTKAKIKET

NT seq 2574 nt +upstreamnt +downstreamnt
atgaatatcgttatcgttgaatctccagcaaaagcaaaaacaattaataaatatcttggg
tctcaatacaaagttgtcgcatcatttggacatgttcgtgatttacctgcaaaagatggt
tctgttttaccggatcgagatttttctatgaaatgggatatagattcttctgccgctaaa
cgtttaaatgaaatagcaaaagccgttaaagaagccgatagccttatattagcaacagac
cctgatcgtgaaggggaagctatttcatggcatattctggatgttcttcgtcaaaaaaaa
gttttaaaagataaacctattaaaagagttgtcttcaatgccatcaccaaaaagtctgtg
cttgatgctatgaacaatccacgtgatattgatacatcacttgtagatgcttatcttgca
cgtcgcgcacttgattatctcgttggttttacactttcacctgttttatggcggaaactc
cctggtgcacgttcagcaggacgcgttcaatcggttgctttgcgtattatttgtgatcgt
gaatcagaaatagaacattttatcaaagaagattattggtccgttacaacacaattaaaa
accatccgaaatgatagtttccaagcaagattgacaatgtttaatcaacgaaaaataggc
aagcttgatattcaatctcaagaacaagcagaccaaattcgctttatgttggagaaatcc
caatatcatacactcagtgttgaagcaaaacctacaaagagaaatcctcttcctccattt
acaacctccacactacaacaagcagcttcttcaaaattaggattttcagcttctcgcact
atgcaaattgcccaaaagctttatgaaggcattgaaattaatggtgaaacggcagggctt
attacttatatgcgtaccgatggtgtgcaaatagcaccagaggctattgattcagcacga
aaagttattcatgaaactttcggtaaagactatattcctgaaaaaccacgtttttattca
acaaaggcaaaaaatgcacaggaagcacacgaagcgatccgtccaacagattttcaacgc
aatcctagtcaagtccgtaattttctcgatagcgatcaagcaaagctctatgagttgata
tggaagcgtgctattgccagccaaatgcgttctgctgaaattgaacgcacaactgttgaa
attgaagcacagcaaggagaaaaccgtgcaaatctacgagcaacaggatctgttattcgc
tttgatggctttatttccgtctacaccgatcaacgagacgaagaaaataatgaagaaaat
gaaacaacacgtttaccacaagtaaacactggtgaagcacttacaaaagaaaaagttgaa
tctgtacagcataccacagagcccccttctcgttattctgaagcttcattaattaaaaag
cttgaggagttaggaattggccgtccttcaacttatgcctccacattggcgacattgtgt
gaccgtggatatattgtaattgataaacgaaagcttattcccgatgctaagggacgtatt
gttacagcctttcttgaaaatttttttaatcgctatgtagaatatggtttcacagcagat
cttgaagaaaagctggatcttatctctgatggaaaactttcttggaaagacgtattgcga
gatttttgggatggatttaatgcatctattagcaatatccaagaactccgtataaccaat
gttcttgatgttttaaatgtaacattagcacctctcgcctttcctgaacgtgaagatgga
agtgatgtgcgttcctgtcctctttgtaaaaatggtcaattatcattaaaactcggtcgt
tatggtgcttttgttggctgttccaattatcccgaatgtaaatacacacaccaactcggt
acagatactggagaagagaatgaagctgtgcgcaatgatgaacctgttatccttggtatt
gaccctgaaacaggaaaagatatctctcttcgtaatggccgttttggtccctatattcaa
cttggtgaaagcaaagaagttaagcgtgcaggactaccaaaagaatggcaggcagaaaat
gtaacccttgataaagccttggctttactatcccttccccgtgaaattggcgttcatcct
gaatctggaaaaacaatcacggctacgattggacgatatggtccctatcttagccataac
ggaaaatctgcgcgccttcttcatgcagatgaagtttttgatattggtatcaatcgcgct
gttacagtattggcagaacaacaagaaaacaaaaccaagcaaagcagagcaacacctgca
gcattggcaatattaggagagcatcccgaaggaggaaccattaccgtacgcaacgggcgt
tatggtccttatgtcaattggggtaaaattaatgcaacgttgccaaaagataaagatccc
attagtgtaacattgccagaggcattagaacttatatcggctaaagcatcaagtaaaaaa
acaacttcaaaaagagcttcttctaaaacaaaagcaaaaataaaagagacataa

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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