KEGG   Bifidobacterium pullorum subsp. gallinarum: ESN35_02305
Entry
ESN35_02305       CDS       T06507                                 
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
bgx  Bifidobacterium pullorum subsp. gallinarum
Pathway
bgx03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:bgx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    ESN35_02305
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bgx03021]
    ESN35_02305
   03400 DNA repair and recombination proteins [BR:bgx03400]
    ESN35_02305
Enzymes [BR:bgx01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     ESN35_02305
Transcription machinery [BR:bgx03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     ESN35_02305
DNA repair and recombination proteins [BR:bgx03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      ESN35_02305
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 Ac81 Focal_AT
Other DBs
NCBI-ProteinID: QAY32398
UniProt: A0A4P6DX74
Position
CACC514:590168..594214
AA seq 1348 aa
MLDVNAFDKLRIGLATADDIRSWSYGEVKKPETINYRTLKPEKDGLFGEQIFGPTRDWEC
ACGKYKRVRFKGIVCERCGVEVTKSRVRRERMGHIELAAPVTHIWFFKGVPSRLGYLLDI
APKDLEKVIYFAAYMVTKVDDEQRHQDLPDLQEELDTEIGNLEKRRNNEIEERAKKVEAD
LAELEAAGEAKGAAKAKLRNSAEREMAAIRQRYDDQIQRISAVFDRFKGLKPGDMEGDVD
LWREMQDRYGDYFEGCMGAEAIKKRLQDFDLEAASKQLREEIDTGTGQRKARALKRLKVV
NAFLTTGNKPEAMVLDVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIE
LGAPEIMLNNEKRMLQEAVDSLFDNGRRGRPVTGASNRPLKSLSDMLKGKQGRFRQNLLG
KRVDYSGRSVIVVGPELRMHQCGLPKPMALELFKPFVIKRLVDLNYAQNMKSAKHLVDRG
DSEVWGVLEEVIAEHPVLLNRAPTLHRLGIQAFEPILVEGKAIHLPPLACAAFNADFDGD
QMAVHLPLSAEAQAEARTLMLASDNILKPADGHTVTMPSQDMILGLYYLSTVVEGAKGQG
RVFSSLAEAQMALDLHEIDMQSMVLIRLPEDFVLPKDWEPRELKVVDAEPGSPDTVREER
FKDGSVLFATSYGRILFNETLPTDYPFVNEQVPKGKLSKIVDDIATRYSTAQVAATLDAL
KDLGFTRAPWSGVTMAYSDIVAPPEREDIVHSYEEEASKVNSQYDMGLLTDEERRQELIN
LWTECTDKVADAMRENFHDDNNVNIMVQSGARGNWMQIRQIAGMRGLVANPKGEIIPRPV
KSNYRDGLSVLEYFISQHGARKGLADTALRTAESGYLTRRLVDVSQEVIVREEDCGTKRG
LAMKVAERDDNGNLVLVKAADGGPYSRLLAADVIDPADNETVLYHAGDALSMDVLNDLVA
HGVEEVKARSVLTCESKRGVCAKCYGWSLATNKLVDVGEAVGIVAAQSIGEPGTQLTLRS
FHSGGVASASDITQGLPRVTELFEARTPKGEAPIAEFAGIVKVEDTDRGRQVTLTPDDST
VEPITYPVTRRAPMLVKDGDHVVAGTQLIEGSVDPKKILRILGPRAAQVNIVEEVHNVYR
SQGVDIHDKHIEVIVHQMLRRITVIDSGDTKLLPGELVDQAKFREANMEAVKNGGKPAAG
RPELMGITKASLATDSWLSAASFQETTRVLTEAALSQKEDDLKGLKENVIIGKLIPAGTG
LARYRNAVVEPDKAIRETIYPNFGLGGDEATDFSDADLSDVDFSSIDFGDLKLGDDFNPD
DFLNDQGGQEDFGGADFSDADLGDLGEI
NT seq 4047 nt   +upstreamnt  +downstreamnt
gtgctggacgtcaacgcatttgacaaactgaggatcggcctggccaccgccgacgacatc
cgcagctggagctacggcgaggtcaagaagcccgaaaccatcaactaccgcaccctgaag
ccggagaaggacggtctgttcggcgagcagatcttcggcccgacccgcgactgggagtgc
gcctgcggcaagtacaagcgcgtgcgcttcaagggcatcgtgtgcgagcgatgcggcgtg
gaggtcaccaagtcccgcgtccgccgtgagcgcatgggccatatcgagctggccgccccg
gtgacccacatctggttcttcaagggcgtgccgagccgcctgggctacctgctggacatc
gcgccgaaggacctggagaaggtcatctacttcgccgcgtacatggtcaccaaggtggac
gacgagcagcgtcaccaggacctgcccgacctgcaggaggagctcgataccgagatcggc
aacctggagaagcgccgcaacaacgagatcgaggagcgcgccaagaaggtcgaggccgat
ctggccgagctcgaggccgccggcgaggccaagggcgccgccaaggccaagctgcgcaac
agcgccgagcgcgagatggcggccatccgccagcgctacgacgatcagatccagcgcatc
tccgccgtgttcgaccgcttcaagggcttgaagcccggcgacatggagggcgacgtggac
ctgtggcgcgagatgcaggatcgctacggcgactacttcgagggctgcatgggcgccgag
gcgatcaagaagcgcctgcaggacttcgacctcgaggcagcctccaagcagctgcgcgag
gagatcgacacgggcaccggccagcgcaaggcccgcgccctgaagcgcctgaaggtcgtc
aacgccttcctgaccaccggcaacaagccggaggccatggtgctggacgtgatcccggtc
atcccgccggatttgcgcccgatggtgcagctggacggcggccgcttcgcgacctctgat
ctgaacgacctgtaccgtcgtgtgatcaaccgcaacaaccgtctgaagcgtctcatcgag
ctcggcgccccggagatcatgctcaacaacgagaagcgcatgctccaggaggccgtggac
tcgctgttcgacaacggtcgccgcggtcgcccggtcaccggcgcctcgaaccgcccgctc
aagtccctgagcgacatgctcaagggcaagcagggccgtttccgtcaaaacctgctgggt
aagcgcgtggactactccggccgttccgtgatcgtggtcggcccggagctgcgcatgcac
cagtgcggtctgcccaagccgatggccctggagctgttcaagccgttcgtcatcaagcgt
ctggtggacctgaactacgcgcagaacatgaagagcgccaagcatctggtggaccgcggc
gactccgaggtgtggggcgtgctcgaagaggtcatcgctgagcacccggtgctgctcaac
cgtgcgcctacgctgcaccgtctgggcatccaggcattcgagccgatcctggtggagggc
aaggccatccacctgccgccgctggcctgcgccgcgttcaacgccgacttcgacggcgac
cagatggccgtgcatctgccgctgagcgccgaggcccaggctgaggcccgcacgctgatg
cttgcctccgacaacatcctgaagccggccgacggccacaccgtcaccatgccgtcccag
gacatgatcctcggcctgtactacctgtcgaccgtggtcgagggcgccaagggccagggc
cgcgtgttctcctcgctggccgaggcccagatggcgctcgatctgcacgagatcgacatg
cagtccatggtgctgatccgtctgcccgaggacttcgtgctgcccaaggattgggagccg
cgcgagctcaaggtggtggacgccgagccgggcagcccggacacggtccgcgaggagcgc
ttcaaggacggttccgtcctgttcgccaccagctacggccgcatcctgttcaacgagacc
ctgccgaccgactacccgttcgtcaacgagcaggtgcccaagggcaagctctccaagatc
gtcgacgacatcgcgacccgctattccaccgcccaggtggccgccacgctggacgccctg
aaggatctgggcttcacgcgcgcgccgtggtccggcgtcacgatggcgtactccgacatc
gtggccccgccggagcgcgaggacatcgtccactcgtacgaggaggaggcatccaaggtc
aactcccagtacgacatgggtctgttgaccgacgaggagcgccgtcaggagctcatcaac
ctgtggaccgagtgcaccgacaaggtggccgacgccatgcgtgagaacttccatgatgac
aacaacgtgaacatcatggtccagtccggcgctcgaggcaactggatgcagatccgccag
attgcgggtatgcgaggcctggtggccaacccgaagggcgagatcatcccccgtccggtc
aagtcgaactaccgcgacggcctgtccgtgctggagtacttcatctcccagcacggcgcg
cgcaagggtctggccgataccgcactgcgtaccgccgagtcgggctacctgacccgtcga
ctcgtggacgtctcgcaggaggtcatcgtccgcgaggaggactgcggcaccaagcgcggt
ctggcgatgaaggtcgccgagcgtgacgacaacggcaacctggtgctcgtcaaggccgct
gacggtggcccgtactcgcgcctgctcgccgccgacgtcatcgaccccgccgacaacgag
accgtgctgtaccacgccggcgacgcgctgtcgatggatgtgctcaacgacctggtggcc
cacggcgtggaggaggtcaaggcccgctccgtgctgacctgcgaatccaagcgcggcgtg
tgcgccaagtgctacggctggtcgctggccaccaacaagctggtggacgtcggcgaggcc
gtcggcatcgtggccgcccagtccatcggcgagcctggtacccagctgacgctgcgttcg
ttccactccggcggcgtcgcctcggcgtccgacatcacccagggtctgccccgtgtcacc
gagttgttcgaggcccgtaccccgaagggtgaggcgccgatcgccgagttcgccggcatc
gtgaaggtggaggacaccgaccgcggccgtcaggtcacgctgaccccggacgattccacg
gtcgagccgatcacctacccggtgacccgtcgcgcgccgatgctggtcaaggacggcgac
cacgtggtggccggcacccagctgatcgagggttccgtggatcccaagaagatcctgcgc
atcctcggcccgcgtgccgcccaggtcaatatcgtggaggaggtgcacaacgtgtaccgt
tcgcagggcgtcgacatccacgacaagcacatcgaggtcatcgtgcaccagatgctgcgc
cgcatcaccgtgatcgactccggcgacaccaagctgctgccgggcgaactggtagaccag
gcgaagttccgcgaggcgaacatggaggccgtgaagaacggcggcaagcccgccgccggc
cgtccggagctgatgggcatcaccaaggcgtcgctggccaccgactcgtggctgtccgcg
gcctccttccaggagaccacgcgcgtgctcaccgaggcggccctgagccagaaggaagac
gacctgaagggcctcaaggagaacgtgatcatcggtaagctgatcccggccggcaccggc
ctggcccgttaccgcaacgcggtggtggagccggacaaggcgatccgcgagacgatctac
ccgaacttcggtctgggcggcgacgaggcgaccgacttctccgacgccgacctgagcgat
gtggacttctccagcatcgacttcggcgacctgaagctcggcgacgacttcaacccggac
gatttcctgaacgatcagggcggccaggaggacttcggcggcgccgacttctccgacgcc
gacctgggcgatctgggcgagatctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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