KEGG   Halalkalibacterium halodurans: BH0002
Entry
BH0002            CDS       T00039                                 
Symbol
dnaN
Name
(GenBank) DNA polymerase III (beta subunit)
  KO
K02338  DNA polymerase III subunit beta [EC:2.7.7.7]
Organism
bha  Halalkalibacterium halodurans
Pathway
bha03030  DNA replication
bha03430  Mismatch repair
bha03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bha00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BH0002 (dnaN)
   03430 Mismatch repair
    BH0002 (dnaN)
   03440 Homologous recombination
    BH0002 (dnaN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bha03032]
    BH0002 (dnaN)
   03400 DNA repair and recombination proteins [BR:bha03400]
    BH0002 (dnaN)
Enzymes [BR:bha01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BH0002 (dnaN)
DNA replication proteins [BR:bha03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     BH0002 (dnaN)
DNA repair and recombination proteins [BR:bha03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     BH0002 (dnaN)
SSDB
Motif
Pfam: DNA_pol3_beta DNA_pol3_beta_2 DNA_pol3_beta_3
Other DBs
NCBI-ProteinID: BAB03721
UniProt: Q9RCA1
Position
2103..3245
AA seq 380 aa
MHFVIDRDIFVQNVNHVSKAVSSRTTIPILTGIKIVADHEGVTLTGSDSDISIETFIPLE
EGDRQNVEVKQEGSIVLQAKVFAEIVKKLPEQEIEIHVQDSFVTTIRSGSSVFNLNGLDP
DEYPRLPVLEEDHVFRLPQKILKDIIRQTVFAVSTQETRPVLTGVNFEIEDGILTCTATD
SHRLAMRKVPVEKNDDELQFSNVVIPGKSLNELSKILDENEELLDIVVTENQTLFKLKNM
LFFSRLLEGKYPVTKNMIPKEAKTSFAVHTKAFLQTLERALLLSREGKNQVINLKTLGDG
VVEVTAITPEIGKVTENVATQGLEGEELRISFNGKNVIDALKVVDSESIHIAFTGAMSPF
VLSPTDHDQSLHLFSPVRTY
NT seq 1143 nt   +upstreamnt  +downstreamnt
atgcattttgtcattgaccgagacatttttgtccaaaatgtcaatcacgtatcaaaagct
gtcagttcacggacaacgattccgattttgacaggaattaaaattgttgcagatcatgaa
ggggttacgctcacaggtagcgattctgatatttcgattgaaacgttcatccctctggaa
gaaggggatcgtcaaaatgttgaagttaaacaagaagggagtattgttcttcaagcgaaa
gtctttgcagagattgtcaaaaaactcccggaacaagaaattgaaattcatgttcaagat
tcatttgttacaacgattcgatctggttcttccgtctttaatttaaacggcttagaccca
gatgaatatcctaggcttcctgtactagaggaagatcacgtctttcgacttccgcaaaaa
attttaaaagacatcattcgacaaactgtgtttgctgtgtccactcaggaaacacgaccg
gtgttgacaggtgtaaactttgaaatagaagacggtattcttacctgtactgcaacagat
agccaccgcttggcgatgcgcaaagttccggtagaaaaaaacgatgatgagttgcaattt
tcaaacgtcgttatccctggaaaaagcttgaatgaattgagcaaaattttagatgaaaat
gaagagctgcttgatattgtcgtaacagaaaatcaaaccctttttaagttaaaaaacatg
ttatttttctctagattgcttgaaggaaagtaccctgtgacgaaaaatatgattccgaaa
gaagcaaaaacatcattcgctgttcatacaaaggcctttttacaaacgttagagcgtgct
cttctcctttcgagagagggtaaaaaccaagtgattaacttaaaaacattaggagatggt
gtcgtagaagttacggcgattacacctgaaattgggaaggtaactgaaaatgtggcgact
caaggcttagaaggggaagaattaagaatttcgttcaacgggaaaaatgtcattgatgcg
cttaaagtcgttgactctgaaagcatccatattgcgtttaccggtgcgatgagtccattt
gtattaagcccaaccgatcacgatcaatcacttcatcttttctcacctgtgcgcacgtac
tag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (3)   
   Pfam (3)   
All databases (17)   

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