KEGG T01393: Bache

Bacteroides helcogenes: Bache_0151

Entry

Bache_0151        CDS       T01393

Name

(GenBank) RNA-binding S4 domain protein

K06178

23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]

Organism

bhl Bacteroides helcogenes

Brite

KEGG Orthology (KO) [BR:bhl00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:bhl03009]
    Bache_0151
Enzymes [BR:bhl01000]
5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.22  23S rRNA pseudouridine2605 synthase
     Bache_0151
Ribosome biogenesis [BR:bhl03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    Bache_0151

SSDB

Motif

Pfam:

PseudoU_synth_2 S4 S4_2 ThiS

Other DBs

NCBI-ProteinID:

ADV42181

UniProt:

E6SSK9

Position

complement(215226..216731)

AA seq 501 aa
MSTENETWREASSSEENSGAGRDGNQFDREGGYSRPSYNRESGERPYRPRYSSEGGDRPQ
RPYNSDRPYRPRFNPNAENGDRPQRSYNSDRSYGNSDRPYRPRYNSDNGDRPQRPSYGSN
MGGDRPYRPRYNDDNSDRPQRPYSADRPQRPRFNSEGEDRPQRPYNNDRPYGGDRSYGNS
DRPYRPRYNGENSDRPQRPYGNNAGGDRPYRPHYNSNGGGRSGGYGNRDSYSRPIRRSAD
YDPNAKYSKKKQIEYKEQFVDPNEPIRLNKFLANAGVCSRREADEFITAGVVSVNGEVVT
ELGTKIKRGDEVKFHDQAVSIERKIYVLLNKPKDTVTTSDDPQARRTVMDLVKGACEERI
YPVGRLDRNTTGVLLLTNDGDLASKLTHPKFLKKKIYHVHLDKNLTKSDMEQIAAGIQLD
DGEIHADAISYTDDFKKDDVGIEIHSGKNRIVRRIFESLGYKVVKLDRVYFAGLTKKGLR
RGEWRYLSEAEVNFLRMGSFE

NT seq 1506 nt +upstreamnt +downstreamnt
atgagtacagaaaacgaaacttggcgtgaagcttcttcctcagaggagaactcaggagcc
ggccgtgatggtaaccagtttgacagagaaggtggatatagccgtccgtcctacaaccgt
gaaagcggcgaacgtccttatcgtccgcgttacagcagtgaaggcggtgatcgtccgcag
cgtccttacaacagcgaccgcccttatcgtccgcgatttaatcctaatgcggaaaatggt
gaccgtccacaacgttcctataatagtgatcgttcgtatggcaacagtgaccgtccttat
cgtccgcgctacaacagtgacaatggtgatcgtccgcaacgtccttcttatggaagtaat
atgggaggtgatcgcccttatcgtccgcgctacaatgatgacaatagcgatcgtccgcaa
cgtccgtacagcgctgatcgtccgcaacgtccgcgttttaatagtgagggcgaagatcgt
ccgcagcgtccttataataatgatcgcccctatggtggcgaccgttcgtatggtaatagt
gaccgtccttaccgtcctcgttataacggtgaaaacagtgaccgtccgcaacgtccttat
ggaaacaatgcaggtggtgatcgtccttatcgtccgcattacaattcgaatggtggtgga
aggtccggcgggtatggtaacagagacagttatagccgtccgattcgtcgttctgccgat
tatgatcctaatgcaaagtatagcaagaagaagcaaattgaatataaagagcaatttgtt
gatcctaatgaaccgattcgtttgaataagttcctggccaatgcaggcgtttgctctcgt
cgtgaagctgatgagttcattacagccggagtagtttccgtaaatggagaagtggttacg
gaattgggtacaaaaattaagcgtggtgatgaagtgaaattccatgatcaggcggtcagt
atcgaacgtaagatttatgtcctattgaataaaccgaaggacacggttactacttctgat
gacccgcaggctcgtcgtaccgtgatggatcttgtgaaaggagcttgtgaagaacgtatt
tatcccgtcggtcgcttggatcgcaataccactggcgtattgttgctgacaaatgatggc
gatctggcttctaaattaacgcaccccaagttcctaaagaagaaaatatatcatgtgcac
ttggataagaatctgacaaaatctgatatggagcagatagcggccggtattcagttggat
gatggcgaaattcatgcagatgctatcagttatacggacgacttcaagaaagatgatgtt
ggcattgagattcattctggtaagaaccgtattgtacgccgtattttcgagtcattggga
tataaggtcgtaaaactggatcgtgtttattttgccggtttaactaagaaaggcttacgt
cgtggtgaatggcgctacctctcggaagcagaggtgaacttcctgcgcatgggatctttt
gagtaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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