KEGG T03379: D558

Bordetella holmesii 44057: D558_2733

Entry

D558_2733         CDS       T03379

Symbol

pheT

Name

(GenBank) phenylalanine--tRNA ligase, beta subunit

K01890

phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]

Organism

bhm Bordetella holmesii 44057

Pathway

bhm00970

Aminoacyl-tRNA biosynthesis

Brite

KEGG Orthology (KO) [BR:bhm00001]
09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    D558_2733 (pheT)
09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:bhm01007]
    D558_2733 (pheT)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:bhm03016]
    D558_2733 (pheT)
Enzymes [BR:bhm01000]
6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.20  phenylalanine---tRNA ligase
     D558_2733 (pheT)
Amino acid related enzymes [BR:bhm01007]
Aminoacyl-tRNA synthetase
  Class II (U)
   D558_2733 (pheT)
Transfer RNA biogenesis [BR:bhm03016]
Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    D558_2733 (pheT)
Prokaryotic type
    D558_2733 (pheT)

SSDB

Motif

Pfam:

tRNA_synthFbeta B3_4 tRNA_bind B5 FDX-ACB VapB_antitoxin

Other DBs

NCBI-ProteinID:

AIT27390

Position

2579568..2581985

AA seq 805 aa
MQFSESWLRTLVNPAIATEELAHQLTMAGLEVEETHSAAPAFSGVVVARIAEIAPHPDAD
KLRVCQVDDGSGALLQIVCGAPNAAAGLVVPLARVGAELPGGMKIGVAKMRGVASSGMLC
SARELGLSQDHGGLLELSADLKPGTDIRQALDLDDTLFVLKLTPNRADCLSILGVAREVA
ALTGAPLAAPQAAAVAVTIDDRLAVNVEAPDLCGRFAGRVIRGVNARAATPEWMKTRLER
AGQRSVSALVDISNYVMLEVGRPSHVFDLDKIQGDLTVRWAKKGERLELLSGTHVELDEK
VGVITAGPIVESMAGIMGGEATAVTLDTRNIYLEAAFWWPGAIAGRARRYKFSSEASHRF
ERGVDYGSIPEHIELITALILDICGGQAGPVDDQIINLPKREPVRMRLARCHRVLGVPVS
HAEVAQIFGRLGLAFAADGDDFVVTPPSYRFDIEIEEDLIEEVARIYGFERIPSVPPVAR
AKMHAQPEVRHGQHAMRRAVAARDYQEVVNYSFVQADWERDYAGNDNPVRLLNPIASHLS
VMRSSLIAGLVAIVRHNANRKQSRVRLFELGRVFQRDAQLADGPLEVAGVRQPLKLAGVA
WGPASEEQWGEPVRQVDFFDVKMDVETLFGKRASQLRFVAERHPAMHPGRAARIELAGQL
VGWVGELHPQWARQADLAHAPVVFELDVTALAQGELPVVRELSRQPVVQRDLALWVDESV
QLQAMLDTVATLIKAEPQLAVVQDIQLFDVWRDKPHEAEPVAEKSLAFRFWLQDTAVTLD
EARVAECISRIKDALVSAHGARQRV

NT seq 2418 nt +upstreamnt +downstreamnt
atgcaattttccgaatcctggctgcgcacgctggtcaatccggccatcgccaccgaagaa
ctcgcgcatcagctcaccatggcggggctggaagtcgaagagacccattccgccgcgccg
gcattcagcggtgtggtggtggcccgtatcgcggaaatcgctccgcacccggacgctgac
aaactgcgcgtgtgccaggtcgatgacggcagtggcgcgttgctgcaaatcgtctgcggc
gcacccaacgctgccgccggtctcgtggtgcccctggcccgcgtgggtgcggaactgcct
ggcggcatgaagataggcgtggccaagatgcgcggtgtggcctcctcgggcatgctgtgc
tcggcgcgcgagctgggtctgtcgcaggaccacggcggtttgttggaactatctgctgac
ctcaaacccggcacggacattcgccaggccctggatctggacgacacgctgttcgtgctc
aagctcacgcccaatcgtgcggattgtctgtccattctgggcgtggcgcgggaagtggcc
gcgctgactggcgcgccgctggctgcgccgcaggccgctgccgttgccgttacgatagac
gaccggctggccgtgaatgtcgaggcgccggatctctgcggccgcttcgcaggccgagtg
atccgaggtgtgaatgcgcgcgctgcgacaccggagtggatgaagacccgcctggaacgg
gccggtcaacgctcggtttcggcgctggtggatatttccaattatgtgatgctcgaagtc
gggcgtccttcgcacgtttttgacctggacaagattcagggcgatctgaccgtgcgctgg
gccaagaaaggcgagcgcctggagctgctcagcggcacccatgtcgaattggacgaaaag
gtcggcgtgatcacggccggtcccatcgtcgagagcatggctggcatcatgggtggcgag
gccaccgcagtaacactcgatacgcgcaatatctatctggaggcggcgttctggtggccg
ggggccatcgcgggtcgtgcgcgtcgctacaaattcagctccgaggccagtcatcgcttc
gagcgtggtgtcgactacggcagcatccccgagcatatcgaactcatcacggcgctgatt
ctggacatctgtggcggccaggccggaccggtcgacgatcagatcatcaatctgcccaag
cgcgagccagtgcgcatgcgcctggcgcgctgccatcgtgtgttgggcgtgccggtctcg
cacgcagaagtggcacagatctttggccgcctcggcctggcgtttgccgccgacggagat
gacttcgttgtcacgccgccctcctatcgctttgatatcgagatcgaagaggatctgatc
gaagaagtcgctcgcatctacggtttcgagcgtatccccagcgtgccgcccgtggcgcgt
gccaagatgcacgcacagccggaagtgcgccatgggcagcatgccatgcggcgcgccgtg
gccgcgcgcgactatcaagaagtggtcaactacagtttcgtacaagcggactgggagcgt
gactacgcgggcaatgacaaccccgtgcgcctgctcaatccgatcgccagccatctttcg
gtgatgcgttcgagcctgatcgccggcctggtggccatcgtgcggcacaacgccaatcgt
aaacaatcgcgtgtgcgcctgttcgagttggggcgggtgttccagcgcgacgcgcaattg
gctgacggcccgctcgaagtggcgggtgtgcggcagccgttgaagctggccggcgtggcc
tggggtcctgccagcgaagagcaatggggtgaacctgtccgtcaggttgatttcttcgat
gtcaaaatggacgtcgagacgctctttggcaaacgagccagccaactgcgctttgtcgcc
gagcgccatccggccatgcatccggggcgtgccgcccgtatcgaactggccgggcagctt
gtcggctgggtgggtgagttgcatcctcagtgggcgcgccaggccgatctggctcacgcg
cccgtggttttcgagctggacgtcacggccctggcccagggcgagctgccggtggtgcgc
gagctctcgcgccagcctgtggtgcagcgcgatctggcgttgtgggtcgacgaatccgtg
caactgcaggcgatgctggataccgttgccacactgatcaaggccgagccgcaactggcg
gtggtgcaggatatccagttgtttgatgtgtggcgcgacaagcctcacgaggcagagccg
gtggccgagaaaagccttgctttccgtttctggctccaggacactgcggttacattggat
gaggcgcgggtcgccgagtgcatcagccgcatcaaggatgccctagtcagcgcgcacggc
gcgcgtcaacgggtttga

All links

Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (23)   

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