KEGG   Bordetella holmesii 44057: D558_3409
Entry
D558_3409         CDS       T03379                                 
Name
(GenBank) FAD binding domain of DNA photolyase family protein
  KO
K01669  deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
Organism
bhm  Bordetella holmesii 44057
Brite
KEGG Orthology (KO) [BR:bhm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bhm03400]
    D558_3409
Enzymes [BR:bhm01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.99  Other carbon-carbon lyases
    4.1.99.3  deoxyribodipyrimidine photo-lyase
     D558_3409
DNA repair and recombination proteins [BR:bhm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   Direct repair
    D558_3409
 Prokaryotic type
    D558_3409
SSDB
Motif
Pfam: FAD_binding_7 DNA_photolyase
Other DBs
NCBI-ProteinID: AIT28049
Position
3188659..3190071
AA seq 470 aa
MNTLVWLRSDLRLHDNQALSAAATQGLTRAVFLASPGQWQTHGDAAVKVDFWRRNLLVLG
SSLAQLGIELSVLTLKDWSQAPQALAVFCAARAIEQVHINAEWGINERRRDQACTDRLAR
DGVSLSTHHCGTLLPPGTVRTGKGDPYRVFTPYARACRDILRSAPPAAQRAPRPQGPVSS
PPSLPDIWPDVDAGIAARWPAGEDAAHARLRDFLDQDLMRYHERRDLPALPGTSALSPYL
ASGVLSPAQCLRAALRANQGEIDSGQQGARAWITELLWREFYLHLLAAYPALSMHQPMRP
ETRYLAWRRAPEDLRAWQEGRTGIPLVDAAQRQLLATGWMHNRLRMVSAMFLAKNLLLDW
RLGEAWFMGHLIDGDLAANNGGWQWSASTGADAVPYFRVFNPITQSRRFDPKAAFLRHWL
PELAGLDDKSIHEPSDAQRRATGYPQAIADLKTSRLRAIEAFSSLPAAGT
NT seq 1413 nt   +upstreamnt  +downstreamnt
atgaacaccctggtttggctgcgcagcgatctgcgcctgcatgacaatcaggcgctaagc
gcagccgccacccagggcctgacccgcgcggtctttcttgcctcacccggccaatggcaa
acgcatggcgatgccgcggtcaaggtcgatttctggcgccgtaacctgctggtgctgggg
tcgtcgctggcgcaattgggcatagagctgtccgtcctgaccctgaaagattggtcgcag
gcaccgcaggcgctggcggttttctgcgcggcgcgcgccatcgagcaggtgcacatcaat
gccgaatggggtattaacgaacggcgacgcgaccaggcctgcaccgaccggttagcgcgc
gacggggtaagcctgagcacgcaccactgcggaacgctcttgccgcccgggacggtgcgc
acgggcaagggcgatccctaccgggtctttacgccctacgcccgtgcctgccgcgacatt
ctgcgcagcgccccgccggccgcgcagcgggcgcctcggcctcaaggcccggtgtcgtcg
cccccgtcattgccggacatctggcccgacgtcgatgcgggcatcgccgcgcgttggcct
gccggcgaggacgcggcccatgcccggctgcgcgattttctcgatcaggatctgatgcgc
tatcacgagcgccgcgatctgcccgccctgccgggcaccagcgccctgtcgccctacctg
gccagcggcgtgctctcgcccgcccaatgcctgcgcgccgccctgcgcgccaaccagggt
gaaatcgacagcggccaacaaggcgcgcgtgcctggatcaccgagctgctttggcgcgag
ttttatctgcatctgctggcggcttatccggcgttgtccatgcatcaacccatgcgaccg
gaaacccgttatctcgcctggcgccgcgcgcccgaggacctgcgggcctggcaggaaggc
cgcacgggcatcccgctggtggatgcggcacagcgccagttgctggccacgggctggatg
cacaaccggctgcgcatggtcagcgccatgtttctggccaagaaccttctgcttgactgg
cgcctgggcgaagcctggttcatgggccacctcatcgatggcgacctcgccgccaacaac
ggcggctggcaatggagcgcgtcgaccggcgcagacgccgtgccctacttccgcgtgttc
aatcccattacgcagtcgcgcagattcgaccccaaagcggcctttctgcgccactggctg
cccgaactggccggtctggacgacaaatccatccatgagccctctgacgcccagcgtcgc
gccaccggctatccgcaagccatcgccgatcttaaaaccagccgcctgcgcgccatcgag
gccttctccagcctgcccgccgcagggacctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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