KEGG T03068: PRJBM

Bartonella henselae BM1374163: PRJBM_00043

Entry

PRJBM_00043       CDS       T03068

Symbol

gyrB

Name

(GenBank) DNA gyrase subunit B

K02470

DNA gyrase subunit B [EC:5.6.2.2]

Organism

bhn Bartonella henselae BM1374163

Brite

KEGG Orthology (KO) [BR:bhn00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bhn03032]
    PRJBM_00043 (gyrB)
   03400 DNA repair and recombination proteins [BR:bhn03400]
    PRJBM_00043 (gyrB)
Enzymes [BR:bhn01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     PRJBM_00043 (gyrB)
DNA replication proteins [BR:bhn03032]
Prokaryotic type
  DNA Topoisomerases
   PRJBM_00043 (gyrB)
DNA repair and recombination proteins [BR:bhn03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      PRJBM_00043 (gyrB)

SSDB

Motif

Pfam:

DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c GyrB_hook GyrB_insert HATPase_c_3 Toprim_4

Other DBs

NCBI-ProteinID:

CDO39442

Position

complement(53481..55913)

AA seq 810 aa
MSDEITSQMEGDDYGAASIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVYEVVDNAIDEA
LAGHATLVNVTLHADGSCSVRDNGRGIPTDIHPTEGVSAAEVIMTQLHAGGKFDQNSYKV
SGGLHGVGVSVVNALSVWLQLRIRRNGKIYEMSFTHGVADAPLKIVGDCGEESGTEIRFL
PSSETFTMVEFDFETLERRLRELAFLNSGVHILLVDQRHADIKSVELHYEGGLTEFVKYI
DQSKKALLDHPIYITSEKDGMSVEVALWWNDSYHEKVLCFTNNIPQRDGGTHLVGFRSAL
TRQINGYAESSGIVKKEKVNLTGDDCREGLTAILSVKVPDPKFSSQTKDKLVSSEVRPIV
ENLVNEGLSAWLEEHPNEAKIVTSKVVEAAAAREAARKARELTRRKGALDITSLPGKLAD
CQERDPAKSEIFIVEGDSAGGSAKSGRSRQNQAILPLRGKILNVERARFDRMLSSDMIGT
LITALGTSIGKDEFSPDKLRYHKIIIMTDADVDGAHIRTLLLTFFFRQMPELIERGHLYI
AQPPLYKVTRGKSFQYIKNEAAFEEFLIDTGLEETTLELSTGEVRAGADLRQLAEDARVL
RQLLNGLHTRYNRNIVEQAAIVGAFNPEAFATPEKAKKTADNVASRLDLIADDMERGWNG
EFTPNGDLYCERILRGVKDVITLDAGLINSVDARQIDRISQNLMETYSSPPLLHRKDKSE
RILGPMSLLESIFTNGKKGITLQRYKGLGEMNAEQLWETTLNPDARALLQVKINDATDAD
SLFSRLMGDEVEPRRAFIQDNALSVANLDI

NT seq 2433 nt +upstreamnt +downstreamnt
atgagtgatgaaataacctcacaaatggagggtgacgactatggtgccgcttctatcaaa
gttctcaaaggtctcgatgctgtacgtaaacgtcctggtatgtatatcggcgatacagat
gatggctcaggcttgcatcatatggtctatgaggttgtagacaacgctattgatgaagcc
ttagcaggtcatgctactcttgtaaacgtgacacttcatgctgatggctcttgttctgtt
cgtgataatggacgcggaatccctaccgatattcatccaacagaaggtgtttcagcagct
gaggttatcatgacccaacttcatgccggcggaaagtttgatcaaaattcttacaaagtt
tcgggaggattacatggcgttggcgtttctgttgtgaatgcactctccgtttggttgcaa
ctgcgaatcaggcgcaatggcaaaatctatgaaatgtcatttactcatggagttgccgat
gctccactaaaaattgtcggtgattgcggcgaagaaagcggaacagagatcaggttttta
ccaagttctgaaacctttaccatggttgaatttgatttcgaaaccttggaacgtcgttta
cgggaattggcttttttgaattctggtgtgcatatccttcttgtcgatcaacgccatgcc
gacatcaaatccgttgaattgcattatgagggtggattaactgaatttgtcaaatatatt
gaccaatcgaaaaaagcgctcctcgatcatcctatttatattacaagtgaaaaagatggg
atgagcgttgaggttgctttatggtggaatgattcctatcatgaaaaagtcctgtgtttt
accaataatatccctcagcgtgatgggggaacccatttggtgggtttccgcagtgctctt
acacgccaaattaatggttatgctgaatcttcaggcattgtaaaaaaggaaaaagtaaac
ctcaccggtgatgactgccgcgaaggactcactgctattctttccgttaaagttcccgat
ccaaaattttcttcgcaaacaaaagataaattggtttcctctgaagtgcggcctattgtt
gaaaatttggtgaatgaaggtctctctgcatggctagaagaacatcctaatgaagcaaaa
attgttacaagtaaagtagtggaggctgcggctgctcgtgaggctgcgcgcaaagcacgt
gaactcacaagacgaaaaggagctctcgatatcacctctttgcctggaaaactcgccgat
tgtcaagaacgtgatccagcaaaatcggagatcttcatcgttgagggagattctgctggt
ggttcagcaaaaagtgggcgctcacgccaaaatcaagcaattttgcctctgcgtggtaaa
attctcaatgtcgaacgagcgcgtttcgaccggatgctctcatctgacatgattggaaca
ctcatcactgctcttggaacatccattggtaaagatgaattctcaccagataaattacgc
taccataaaatcatcattatgaccgatgctgacgttgatggtgcgcatatacgcactctg
ctccttactttcttttttagacaaatgcctgaattgattgagcgtggacacctttatatc
gctcaaccgcctctttataaagtaacacgggggaagtcttttcaatatatcaaaaatgaa
gcagcgttcgaagaatttttgatcgatactggactagaagaaacaacattagaactctca
acaggagaagttcgtgcaggtgctgatttgcgccaacttgccgaagatgctcgcgtgtta
cgccaacttttaaatggtcttcatacgcgctataatcgcaatattgttgagcaagcagca
attgttggggcttttaatcctgaggcttttgcaacaccagaaaaagccaaaaaaacagct
gataatgtagcaagtcgcctcgatttgattgccgatgatatggaacgcgggtggaatggt
gagttcacaccaaatggggatttgtattgtgaacgcattttacgcggggttaaagatgtc
attacccttgatgcaggacttataaattcagttgatgcacgccaaattgatcgtatttct
caaaatcttatggaaacatatagttctccccctctcttgcatcgtaaagataaatcagaa
cgtattttgggacctatgagtctcttagaaagcatttttacaaatggtaaaaaaggcatc
acgcttcaacgttataaaggtcttggagaaatgaatgctgaacagctttgggaaacaacg
cttaatcctgatgcgcgcgctcttttacaagttaaaatcaatgatgcaactgatgcagat
tcgctcttttcccgtttgatgggtgatgaagttgaaccacggcgggcttttattcaagat
aatgccttaagtgttgctaatcttgatatctaa

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (17)   

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