KEGG   Bordetella holmesii ATCC 51541: D560_0669
Entry
D560_0669         CDS       T03052                                 
Name
(GenBank) AMP-binding enzyme family protein
  KO
K01897  long-chain acyl-CoA synthetase [EC:6.2.1.3]
Organism
bho  Bordetella holmesii ATCC 51541
Pathway
bho00061  Fatty acid biosynthesis
bho00071  Fatty acid degradation
bho01100  Metabolic pathways
bho01212  Fatty acid metabolism
bho02024  Quorum sensing
Module
bho_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:bho00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    D560_0669
   00071 Fatty acid degradation
    D560_0669
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    D560_0669
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:bho01004]
    D560_0669
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:bho04147]
    D560_0669
Enzymes [BR:bho01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     D560_0669
Lipid biosynthesis proteins [BR:bho01004]
 Acyl-CoA synthetase
  Long/very long chain acyl-CoA synthetase
   D560_0669
Exosome [BR:bho04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   D560_0669
  Exosomal proteins of breast cancer cells
   D560_0669
SSDB
Motif
Pfam: AMP-binding AMP-binding_C
Other DBs
NCBI-ProteinID: AHV94462
Position
complement(623108..624793)
AA seq 561 aa
MQRPWLAHYPQGVPAEISIAPYASLTDLLDQACKRHADRIACTAMGSDIRFAQLDQWARS
FAAWLQARGLARGSRVALMMPNVPAYLVALLGSLRAGMVVVNVNPLYKPDELQRQLLDSG
AETIVILENFAATLQAVGDRSDLKHVVVVGPGDLLGGLKAPLVNFAARHIKKLVPSWHLE
GAWPLSRVLQEGARAGFTPPELSMNDLAVLQYTGGTTGVPKGAMLTHGNLVANILQVGAV
ARPVLGDLNGPPLTMLSALPLYHVFALTVCGLFGLHAGMRNLLIINPRDQASLIAAWKRV
PVNVFPGVNTLFNALVDNPGFAGLDFSGLRLTLGGGMAVQPSVAERWLQITGHPLIEGYG
LSETSPVATVNPTDSAAYSGAIGLPLPSTDVAILDDLGNEVPLGERGEVAIRGPQVMAGY
WQKPQETALVMTADGFFRSGDIGIMDERGYTRIVDRKKDMIAVSGFKVYPNEVEAVIAAY
PGVRECAVIGVPDGHSGEAVRAYVVRRDASVTEADILKWCEGKLTGYKRPRAILFRDELP
KSNVGKILRRELRDEAVASRT
NT seq 1686 nt   +upstreamnt  +downstreamnt
atgcagagaccctggctcgcgcactatccgcaaggcgtgcccgccgagatttccatcgcg
ccctacgcctcgttgacggacttgctggatcaagcctgcaagcgtcacgccgatcgcatc
gcctgcacggccatgggcagcgacatccggtttgcccaattggatcagtgggcgcgcagt
ttcgcagcttggttgcaggcgcgcggtctggcgcgtggcagccgggtggcgctgatgatg
cccaacgtacccgcttatctggtggcattgctgggcagcctgcgcgcaggcatggtggtg
gtcaatgtcaatccgctctacaaacccgatgaattgcagcgtcaactgctcgacagcggc
gccgaaaccatcgtcattctggagaacttcgcggcgaccctacaggccgtgggcgatcgc
agcgatctcaaacacgtggtcgtggtggggccgggggatctgctgggcggcctgaaggcg
ccgctggtcaacttcgcggcgcgtcacatcaaaaagctggtgccgtcctggcatctggag
ggggcctggccgttgtcgcgggttctgcaagagggcgcgcgcgcgggtttcaccccgccc
gaactgagcatgaacgacctggccgtgctgcagtacacgggcggcactacgggggtgccc
aagggggctatgctcacgcatggcaacctggtggccaatatcctgcaggtgggcgccgtt
gcgcggccggtgctgggcgacctgaacggcccaccgttgaccatgctcagcgctttgccg
ctctaccacgtgtttgcgctgacggtctgcggattgttcggcctgcacgccggcatgcgc
aacctgctcatcatcaatccccgcgatcaggcctcgttgattgccgcctggaagcgcgta
ccggtcaacgtgtttccgggtgtcaatacgcttttcaatgcgctggtggataacccgggc
tttgccgggctggatttttcgggcctgaggctgaccttgggcggcggcatggcggtgcaa
ccctccgtggccgagcgttggttgcagattaccggccatccgctcatcgagggttatggc
ttgtcggagacatcgccggtggcgaccgtcaacccgaccgattcggcggcctattcgggc
gcgattggtttgcctttgccgtcgactgacgtcgccattctggatgatctgggtaatgag
gtgccgttgggcgaacgtggcgaagtcgcgatccgtggcccgcaggtcatggccggctat
tggcagaaaccccaggaaaccgccctggtcatgaccgcggacggtttctttcgcagcggt
gatattggcatcatggacgagcgcggctacacgcgtatcgtggaccgcaagaaagacatg
attgccgtgtccggcttcaaggtctaccccaacgaagtcgaagccgtcattgccgcctat
ccgggcgtgcgcgaatgcgccgtgatcggcgtgcctgacgggcattcgggcgaggccgtg
cgcgcctacgttgtcaggcgcgatgcctcggtgaccgaagccgacattcttaagtggtgc
gaaggcaagcttacgggctacaagcggccgcgggcgatactgtttcgtgatgagctgccc
aaaagcaatgtgggcaagatattgcggcgcgagctgcgtgacgaggcggtggccagccgc
acgtaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (27)   

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