KEGG T03052: D560

Bordetella holmesii ATCC 51541: D560_0699

Entry

D560_0699         CDS       T03052

Symbol

valS

Name

(GenBank) valine--tRNA ligase

K01873

valyl-tRNA synthetase [EC:6.1.1.9]

Organism

bho Bordetella holmesii ATCC 51541

Pathway

bho00970

Aminoacyl-tRNA biosynthesis

Brite

KEGG Orthology (KO) [BR:bho00001]
09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    D560_0699 (valS)
09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:bho01007]
    D560_0699 (valS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:bho03016]
    D560_0699 (valS)
Enzymes [BR:bho01000]
6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.9  valine---tRNA ligase
     D560_0699 (valS)
Amino acid related enzymes [BR:bho01007]
Aminoacyl-tRNA synthetase
  Class I (U)
   D560_0699 (valS)
Transfer RNA biogenesis [BR:bho03016]
Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    D560_0699 (valS)
Prokaryotic type
    D560_0699 (valS)

SSDB

Motif

Pfam:

tRNA-synt_1 Anticodon_1 Val_tRNA-synt_C tRNA-synt_1g tRNA-synt_1_2 ABC_tran_CTD tRNA-synt_1b

Other DBs

NCBI-ProteinID:

AHV92118

Position

649857..652736

AA seq 959 aa
MTQAADPKNDTAELSKSFEPTDIESRWYDEWNLRGYFQAGRHVETGTDPQPYCIQFPPPN
VTGTLHMGHAFNQTIMDGLIRYHRMTGDDTVFIPGTDHAGIATQIVVERQLDAQKLSRHD
LGRERFVEKVWEWKEQSGNTITSQVRRLGASADWPREYFTMDDRMSRGVVQTFVELYRQG
LIYRGKRLVNWDPKLLTAVSDLEVQSEETDGHMWHILYPFVDGPQTIIDEEGNPVTLRGM
TIATTRPETMLADGALCVHPDDPRYKHLVGKLVELPLCDRNIPIIADDFVDPKFGTGCVK
ITGAHDFNDYACALRHKLPLIVIFTLDAHINENGPTQFQGLERYEARKAVVAELEQKGYL
VKVEPHKMMQPKGDRTGVVLEPMLTDQWFVAMSEPAPEGTFNPGKSITEVALQAVADGSI
QFYPENWTTIYNQWLNNIQDWCISRQLWWGHQIPAWYAEDGRCFVAHSEEEALELARAAG
VTGPLTRDPDVLDTWFSSGLVPFTTLGWPEKTEDLARYLPSSVLVTGFDIIFFWVARMVM
LTMHMTGNIPFKHVYVHGLIRDADGHKMSKSKGNTLDPVDLIDGIDLEQLVAKRTYGLMN
PKQAGSIEKATRRQFPDGIPAFGTDALRFTMAAYATLGRNINFDLKCCEGYRNFCNKLWN
ATRFVLMNTEGHALHGTEQGELSFADRWIVSQLQALEADIARGFDDYRFDNIANALYRYV
WDEYCDWYLELAKVQIQTGTPAQQLGTRRTLIRVLEVVLRLAHPIIPFITEELWQKVSVV
AGKRIAGHADSVSVQPYPRANPAAIDLEAEAEVAELKAQIEAVRALRGEMGLSPAQRVPL
IAQGDAALLRRNAPYLAALAKLSQVDVADTLPDAGAPVQVVGKARLMLHVEVDVVAERAR
LDKEIARLEGEIGKAAGKLSNPSFVERAPAAVVEQEKARVAQFNETLAKVRDQRGKLGN

NT seq 2880 nt +upstreamnt +downstreamnt
atgactcaagctgccgaccccaaaaacgacactgcggagctctcaaagagcttcgagccc
accgatatcgaatcacgctggtatgacgaatggaaccttcgcggctacttccaggcaggc
cgccacgtagaaacagggaccgaccctcagccctattgcatccagttcccgccgccgaac
gtgacgggcacgctgcatatgggccatgccttcaatcagaccatcatggatggcctgatc
cgctaccaccgcatgacgggcgatgacaccgttttcatccctggcaccgatcacgccggc
atcgccacgcagatcgtggtcgaacgccaactggacgcgcagaaactctcgcgccacgac
ttggggcgcgagcgcttcgtcgagaaagtgtgggaatggaaagaacagtccggcaacacc
atcaccagccaagtgcgccgcctgggcgcctcggcggactggccacgcgagtacttcacg
atggacgaccgcatgtcgcgcggcgtcgtccagacgttcgttgagctctaccgccagggc
cttatctaccgcggcaagcggctggtgaattgggatcccaagctgctgaccgccgtctcc
gacctcgaggtgcaatccgaggagaccgatggccacatgtggcacatcctctaccccttc
gtcgacggcccgcaaaccatcatcgacgaggaaggcaatccggtcaccctgcgcggcatg
accatcgcgaccacccgccccgagaccatgctcgccgatggggccctgtgcgtgcatccc
gacgacccgcgctacaagcacctggtgggcaagctggtcgaactgcccctgtgcgaccgc
aacatccccatcatcgcagacgacttcgtcgatccgaaattcggcaccggctgcgtgaag
atcaccggggcgcatgatttcaacgactacgcctgcgcgttgcgccacaaactgccgttg
atcgtcatctttacgctcgacgctcacatcaacgaaaacggccccacgcaattccagggt
ctggagcgctacgaagcccgcaaggccgtcgtcgccgagcttgagcaaaaaggatacctg
gtcaaggtcgagccgcacaagatgatgcagcccaagggcgatcgcactggtgtggtgctc
gaacccatgctgaccgatcagtggttcgtcgccatgagcgaaccggccccggagggcacg
ttcaatcccggcaagagcatcaccgaggtggcattgcaggccgtggccgacggtagtatt
cagttctatcccgagaactggaccactatctataaccagtggctcaacaatatccaggat
tggtgcatctcccgccagttgtggtggggccaccagattcctgcgtggtatgccgaggac
ggccgttgctttgtggcccactccgaagaagaggcactggagttggcccgcgccgctggc
gtgaccggtccgctgacacgtgacccggatgtattggacacctggttttcctccggcctc
gtaccgtttacgacgcttggctggcccgagaagaccgaagacctggcccgctatctgccg
tccagcgtgctggtcacgggctttgacatcattttcttctgggtcgcgcgcatggtgatg
ctcaccatgcacatgaccggcaacattccgttcaagcacgtttacgtgcatggactgatc
cgcgatgccgacggccataagatgagcaaatccaaaggcaacacgctggatcccgtcgac
ctcatcgacggcatcgacctggaacagctcgtagccaagcgcacctatggcttgatgaac
ccaaagcaggccggctcgattgaaaaggccacgcgccgccagttccccgatggcattccg
gctttcggtacggacgcactgcgctttaccatggcggcctacgccacgctgggccgcaat
atcaatttcgacctcaagtgctgcgagggttaccgcaacttctgcaacaagctctggaac
gctacccgcttcgtgctgatgaacacggaaggccacgctctgcatggcaccgagcaaggc
gagctgtcctttgcggatcgttggatcgtcagccaattgcaagcgttggaagcagacatt
gcgcgcggctttgacgactaccgcttcgacaatatcgccaatgcgttgtatcgctacgtc
tgggatgagtactgcgactggtatctcgaactggccaaggttcagatccagaccggcacc
cctgcccagcaactgggcactcgccgcacgctcatccgcgtgctggaagtcgtcctgcgc
ctggctcaccccatcatcccattcattacggaagagctctggcagaaagtttcggtcgtc
gccggcaaacgcatcgccggccacgccgacagcgtcagcgtgcagccctacccgcgcgcc
aatcccgccgcgatcgacctcgaggcggaagccgaagtcgctgaactcaaggcccagatc
gaagccgtgcgcgcgctgcgcggcgagatgggcctgtcgccggcgcagcgcgtcccgctg
atcgcgcagggtgacgccgccctgctgcgccgcaatgcgccgtatctcgcggcgcttgcc
aaactcagccaggtcgatgttgccgacacgctgcccgacgccggagcccctgtgcaggtg
gtgggaaaggccaggctcatgctgcatgtcgaagtcgacgtcgtggccgagcgcgcgcgc
ctggacaaggagatcgcccgcctggagggcgagatcggcaaagctgccggcaaactgagc
aaccccagttttgtcgaacgggcgccagccgccgtggttgaacaagaaaaggcccgcgtg
gcccagttcaacgaaacgctggccaaggtgcgcgaccagcgcggcaagctgggtaattaa

All links

Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (24)   

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