KEGG   Bordetella holmesii ATCC 51541: D560_3005
Entry
D560_3005         CDS       T03052                                 
Symbol
miaB
Name
(GenBank) tRNA-i(6)A37 thiotransferase enzyme MiaB
  KO
K06168  tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
Organism
bho  Bordetella holmesii ATCC 51541
Brite
KEGG Orthology (KO) [BR:bho00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:bho03016]
    D560_3005 (miaB)
Enzymes [BR:bho01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.3  tRNA-2-methylthio-N6-dimethylallyladenosine synthase
     D560_3005 (miaB)
Transfer RNA biogenesis [BR:bho03016]
 Prokaryotic type
  tRNA modification factors
   Methylthiotransferases
    D560_3005 (miaB)
SSDB
Motif
Pfam: UPF0004 Radical_SAM B12-binding Fer4_12
Other DBs
NCBI-ProteinID: AHV92560
Position
2799260..2800597
AA seq 445 aa
MHETTLKREGAPAASSPAPTASGKIYIRTFGCQMNEYDSDKMVDVLREDQGLEVTDNPEE
ADVILFNTCSVREKAQEKVFSDLGRVQHLKKLNPHLVIGVGGCVASQEGEAIVKRAPYVD
VVFGPQTLHRLPELIRRRRDEGVSQVDISFPEIEKFDNMPPARIEGATAFVSIMEGCSKY
CSFCVVPYTRGEEVSRPFEDVLTEVADLADQGVREVTLLGQNVNAYRGRMEGSDEIADFA
MLLEYVHEIPGIERIRYTTSHPKEMTQRMVEAYARLPKLVSFLHLPVQAGSDRVLSAMKR
GYTALEFKSVVRKLRAARPNLTLSSDFIVGFPGETEEDFQKTMKLIADVGFDTSFSFVYS
RRPGTPAADLSDDTPQDVKLKRLQQLQALINEQAAAIAQSMVGTRQRLLVEGLRGATPTS
SWAERKTTASLTSRGLHAWSATWWM
NT seq 1338 nt   +upstreamnt  +downstreamnt
atgcacgaaaccacactcaagcgcgaaggcgctcccgctgcgtcgtcgcccgcccccacg
gcaagcggaaaaatttatattcggaccttcggctgccagatgaacgagtatgactcggac
aaaatggtggatgttttgcgcgaagaccaggggttggaagtgaccgacaaccccgaggaa
gccgacgtcattttatttaatacctgttcggtgcgcgagaaggcgcaggaaaaagtcttc
tccgatttgggccgcgtacagcacctgaagaaactcaatccgcatctggtgataggcgtc
ggtggctgcgtcgccagtcaggaaggcgaggccatcgtcaagcgtgcgccttacgttgac
gtggtgttcgggccacagaccttgcatcggctgcccgagctgatccgccggcgtcgcgat
gagggtgtttcgcaggtcgacatcagctttcccgagatcgagaaattcgacaacatgccg
ccggctcgcattgaaggcgccacggctttcgtatcgatcatggaaggttgcagcaagtac
tgcagtttctgcgtggtgccgtatacgcgcggcgaagaggtgtcacgccctttcgaagac
gtactgaccgaggttgccgatctggccgatcagggcgtgcgcgaagtcacgctgctgggt
cagaacgtcaacgcctaccgtggccggatggaaggcagcgatgaaatcgctgatttcgcc
atgctgctcgagtatgtgcacgaaatccccggcatcgagcgcatccgctataccacctcg
cacccgaaggaaatgacgcagcgcatggtcgaggcctatgcccgcctgcccaagctggtg
tcgtttctgcatctgcccgtgcaggcgggtagcgaccgggtgttgtcagccatgaagcgc
ggctacacggcgctggagttcaagtcggtggtccgcaagctgcgtgccgcgcggcccaat
ctgaccctgtcttccgactttatcgtgggctttcccggcgaaaccgaggaagacttccag
aagacgatgaagcttatcgccgacgtgggtttcgacacgtcgttttcctttgtgtactcg
cgccgcccggggacgccggcagccgatctgagcgacgatacgccgcaagacgtcaaactc
aagcgcttgcaacaactgcaggcattgatcaacgagcaggccgccgccattgcccaaagc
atggtcggaacgcgccagcgcctgctggtcgagggccttcgcggcgcgaccccaacgagc
tcatgggccgaacggaaaacaaccgcatcgttaacttcccggggcctgcacgcctggtcg
gcaacatggtggatgtga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (23)   

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