KEGG T03052: D560

Bordetella holmesii ATCC 51541: D560_3665

Entry

D560_3665         CDS       T03052

Symbol

rph

Name

(GenBank) ribonuclease PH

K00989

ribonuclease PH [EC:2.7.7.56]

Organism

bho Bordetella holmesii ATCC 51541

Brite

KEGG Orthology (KO) [BR:bho00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:bho03016]
    D560_3665 (rph)
Enzymes [BR:bho01000]
2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.56  tRNA nucleotidyltransferase
     D560_3665 (rph)
Transfer RNA biogenesis [BR:bho03016]
Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    D560_3665 (rph)

SSDB

Motif

Pfam:

RNase_PH RNase_PH_C

Other DBs

NCBI-ProteinID:

AHV94366

Position

complement(3405608..3406342)

AA seq 244 aa
MTSPDTFARPDGRAVDALRPFHLQRGFTRYAEGSVLVVAGNTQVLCTASVLDKVPPFLKG
KGEGWVTAEYGMLPRATHTRGDREAARGKQSGRTQEIQRLIGRSLRAVVDLKLLGERTLH
LDCDVLQADGGTRCASITGAWVATADAVALLIERGQLTQNPIRDHVAAVSVGLVGGRAVL
DLNYEEDSACEADVNVVMTGAGAFVEVQGTGEEATFTRAQLDTMLGLAEGGVAQLVMAQR
AARS

NT seq 735 nt +upstreamnt +downstreamnt
ttgacctcacccgatacctttgcccgtcccgatggccgcgccgttgatgccttgcggccg
ttccatttgcagcgcggttttacccgttatgccgaaggatcggtgctggtggtggcgggc
aacacccaggtgctctgcacggccagtgtgctggacaaggtaccgccctttttgaagggc
aaaggagagggctgggttacggctgagtacggcatgctgccccgcgccacgcacacccgc
ggcgaccgggaagccgcgcgtggcaagcaaagcggccgtacgcaggagattcagcgcctg
attggccgctccttgcgtgcggtggtcgacctgaagttgctgggagagcgcaccctgcac
ctggattgcgatgtcctgcaagccgatggcggcacgcgctgcgccagcattaccggtgcc
tgggtcgcgacagccgacgccgtggcattgctgatagagcgcggccagttaacgcaaaac
cccatccgtgatcacgtcgccgccgtgtccgtcggtctggtgggcgggcgcgcggttctg
gacctcaactacgaggaagactctgcctgcgaagcggacgtcaatgtcgtcatgacgggc
gctggcgctttcgtggaagtgcagggaacgggcgaggaggcaactttcacacgggcgcag
ctagacaccatgctggggctggccgaaggtggggttgcacaactggtgatggctcaacgt
gcggcccgtagctag

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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