KEGG   Bartonella henselae BM1374165: BM1374165_00218
Entry
BM1374165_00218   CDS       T03309                                 
Symbol
pnp
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
bhs  Bartonella henselae BM1374165
Pathway
bhs03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bhs00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BM1374165_00218 (pnp)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bhs03019]
    BM1374165_00218 (pnp)
   03016 Transfer RNA biogenesis [BR:bhs03016]
    BM1374165_00218 (pnp)
Enzymes [BR:bhs01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     BM1374165_00218 (pnp)
Messenger RNA biogenesis [BR:bhs03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     BM1374165_00218 (pnp)
Transfer RNA biogenesis [BR:bhs03016]
 Prokaryotic type
  tRNA degradation factors
   BM1374165_00218 (pnp)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C PNPase S1 KH_1 DUF2533 PCB_OB DOT1
Other DBs
NCBI-ProteinID: CDO46243
UniProt: X5M5U3
Position
complement(278591..280792)
AA seq 733 aa
MFKTHKIEIEWAGRPLTLETGKIARQADGAVIATYGETIVLATVVSAKSPKPDQDFFPLT
VNYQEKSYAVGRIPGGYLKRESRPSENETLISRLIDRPIRPLFADGYKNDTQVIVSVIQH
DLENNPDILAMIASSAALTLSGVPFMGPIAGARVGYCNGQYILNPHIDEMSESKLDLVVA
GTENAVLMVESEAQELPEDIMLGAVMFGHKGLQPILDAIIKLAEVAAKDPRDFVPEDLSD
LETAMLEMAEKDIRKAYTITDKQERYAALDALKTEIINKFMPETEEGCKFSVDQIATVFK
QLQAKIVRSNILDTKKRIDGRDLSTVRPIQSEVGILPRTHGSALFTRGETQAIVVATLGT
GEDEQYIDSLTGMYKETFLLHYNFPPFSVGETGRLGSPGRREIGHGKLAWRAIHPMLPSK
ESFPYTIRAVSEITESNGSSSMATVCGTSLALMDAGVPLARPVAGIAMGLIKEGERFAVL
SDILGDEDHLGDMDFKVAGTANGITALQMDIKIDGITEEIMKIALEQAKGGRIHILNEMA
KALTSARAELSEFSPRIEVMNIAVDKIRDVIGTGGKVIREIVEQTGAKINIEDDGTIRIA
SADAKTIEAAKRWIHSIVDEPEVGVIYQGTVVKTAEFGAFVNFFGSRDGLVHISQLTTER
VTKTTDVVKEGDKVWVKLMGFDERGKVRLSMKIVDQKTGKEIIGEDSIKAEQEKYTEETH
KSENKRRRKKKEE
NT seq 2202 nt   +upstreamnt  +downstreamnt
atgttcaaaacacacaagatagaaattgaatgggcaggcaggccactaacccttgagaca
gggaaaatagcgcgtcaagctgatggcgcagtcattgctacctacggtgaaactattgtc
ttagcaaccgtggtatcagcaaaaagccccaaaccagaccaagacttttttccactcacc
gttaattatcaagaaaaatcctatgctgttggtagaatccccggtggttatttaaaacgt
gaaagccgaccaagtgaaaatgaaactttaatttcacgtttaattgatcgtccgattcgc
cctctcttcgctgacggttataaaaatgatacacaagtcattgtgtctgttatacagcat
gatcttgaaaacaacccagatattctcgcaatgattgcatcttctgctgcattaactctg
tcaggtgttcctttcatgggccccattgccggagctcgtgttggctattgtaacggacaa
tatattctcaatccccatatcgatgaaatgtccgaatcaaaactcgatctcgttgttgcc
ggaacagaaaatgctgtattgatggttgaatcagaagctcaagaattgcctgaagacatc
atgttgggtgccgttatgtttggacacaaaggtcttcaacctattcttgatgctattatc
aaacttgccgaagttgctgcaaaagatccacgcgattttgttcccgaagatctctctgat
ctcgaaacagctatgctggaaatggccgaaaaggatatacgaaaagcctatacaattacc
gataaacaggaacgttacgctgcacttgatgcacttaaaacagaaatcatcaataaattt
atgccagaaacagaagaaggctgtaaatttagtgtagatcaaattgcaaccgttttcaaa
cagttgcaagcaaaaattgttcgctcaaatattcttgatacgaaaaagcgtattgatgga
cgcgacctttcaacagtacgtcccatccaatcggaggttggtattttaccccgaacacac
ggatcggcactctttacccgtggcgaaacacaagcaattgtcgttgcaacactaggaacc
ggtgaagatgaacaatatatcgattctttaacgggtatgtataaggaaacattcctcctt
cattataattttccaccattttcagtgggtgaaacaggacgtcttggctctcctggtcgc
cgcgaaatcgggcatggtaaactggcgtggcgtgccattcatcctatgttgccaagtaag
gaatcctttccttacactattcgtgctgtttcagaaatcactgaatccaatggatcttct
tccatggcaacagtttgcggaacttcccttgctctcatggatgccggtgttcctctggca
cgtcccgttgcaggtattgccatgggtttgattaaagaaggtgaacgttttgctgtgctc
tctgatatcttaggagatgaagatcatcttggagacatggattttaaagtagccggaaca
gcaaatggtattaccgccttgcaaatggatatcaaaattgatggtattaccgaagagatt
atgaaaatcgcgcttgaacaagccaaaggtggtcgaatccatatccttaatgaaatggcc
aaagctttaaccagtgcacgtgctgaactcagtgaattttctccacgcatcgaagttatg
aacattgctgttgataaaattcgcgatgttatcggtactggcggtaaagttattcgagaa
atcgttgaacaaactggagcaaaaatcaatatcgaagatgatggaaccattagaattgct
tctgccgatgccaaaactattgaagcagcaaaacgctggattcattcgattgttgatgaa
cctgaagttggcgttatttatcaaggaacagttgtaaaaactgcagaattcggtgcattt
gtaaacttttttggctcacgtgatgggcttgtgcatatctctcaacttacaacagaacgt
gtcacaaaaacaacagatgttgttaaagaaggcgataaagtttgggttaaattaatgggt
tttgatgagcgtggtaaagttcgcttatcaatgaaaatcgtcgaccaaaagaccggtaaa
gaaattattggtgaggattcgataaaagcagaacaagaaaaatacacagaggaaacacat
aaatctgaaaacaagcgccgtcgtaagaaaaaagaagagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (19)   

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