KEGG   Bacillus halotolerans: DIC78_09550
Entry
DIC78_09550       CDS       T06619                                 
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
bht  Bacillus halotolerans
Pathway
bht03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:bht00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    DIC78_09550 (rpoB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bht03021]
    DIC78_09550 (rpoB)
   03400 DNA repair and recombination proteins [BR:bht03400]
    DIC78_09550 (rpoB)
Enzymes [BR:bht01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     DIC78_09550 (rpoB)
Transcription machinery [BR:bht03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     DIC78_09550 (rpoB)
DNA repair and recombination proteins [BR:bht03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      DIC78_09550 (rpoB)
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_2 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_45 RNA_pol_Rpb2_1
Other DBs
NCBI-ProteinID: AZV49239
Position
complement(1884207..1887788)
AA seq 1193 aa
MTGQLVQYGRHRQRRSYARISEVLELPNLIEIQTSSYQWFLDEGLREMFQDISPIEDFTG
NLSLEFIDYSLGEPKYPVEESKERDVTYSAPLRVKVRLINKETGEVKDQDVFMGDFPIMT
DTGTFIINGAERVIVSQLVRSPSVYFSGKVDKNGKKGFTATVIPNRGAWLEYETDAKDVV
YVRIDRTRKLPVTVLLRALGFGSDQEILDLVGENEYLRNTLDKDNTENSDKALLEIYERL
RPGEPPTVENAKSLLDSRFFDPKRYDLANVGRYKINKKLHIKNRLFNQRLAETLVDPETG
EILAEKGQILDRRTLDKVLPYLENGIGFRKLYPNGGVVEDEVTLQSIKIFAPTDQEGEQV
INVIGNAYVEEEIKNITPADIISSISYFFNLLHGVGDTDDIDHLGNRRLRSVGELLQNQF
RIGLSRMERVVRERMSIQDTNTITPQQLINIRPVIASIKEFFGSSQLSQFMDQTNPLAEL
THKRRLSALGPGGLTRERAGMEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSYAKVNRF
GFIETPYRRVDPETGKVTPRIDYLTADEEDNYVVAQANARLDDEGAFVDDSIVARFRGEN
TVVPRNRVDYMDVSPKQVVSAATACIPFLENDDSNRALMGANMQRQAVPLMQPEAPFVGT
GMEYVSGKDSGAAVICKHPGIVERVEAKNVWVRRYEEVDGQKVKGNLDKYSLLKFVRSNQ
GTCYNQRPIVSVGDEVVKGEILADGPSMELGELALGRNVMVGFMTWDGYNYEDAIIMSER
LVKDDVYTSIHIEEYESEARDTKLGPEEITRDIPNVGEDALRNLDDRGIIRIGAEVKDGD
LLVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGGGGIIHDVKVFNREDGDE
LPPGVNQLVRVYIVQKRKISEGDKMAGRHGNKGVISKILPEEDMPYLPDGTPIDIMLNPL
GVPSRMNIGQVLELHMGMAARYLGIHIASPVFDGAREEDVWETLEEAGMSRDAKTVLYDG
RTGEPFDNRVSVGIMYMIKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEV
WALEAYGAAYTLQEILTVKSDDVVGRVKTYEAIVKGDNVPEPGVPESFKVLIKELQSLGM
DVKILSSDEEEIEMRDLEDEEDAKQADGLALSGDEEPEETASADVERDVVTKE
NT seq 3582 nt   +upstreamnt  +downstreamnt
ttgacaggtcaactagttcagtatggacgacaccgccagcgcagaagctatgctcgcatt
agcgaagtgttagaattaccaaatctcattgaaattcaaacctcttcttatcagtggttt
cttgatgagggtcttagagagatgtttcaagacatatcgccaattgaggatttcactggt
aacctctctcttgagttcattgattacagtttaggggagcctaaatatcctgtagaggaa
tcaaaagaacgtgatgtgacttactcagctccgctaagagtgaaggttcgtttaattaac
aaagaaactggagaggtaaaagaccaagatgtcttcatgggtgatttccctattatgaca
gatacaggtacttttatcataaacggtgcggaacgcgttatcgtttcccagcttgttcgg
tctccaagtgtatatttcagtggtaaagtagacaaaaacggtaaaaaaggttttaccgca
actgtcattccaaaccgtggcgcatggttagaatacgaaactgatgcgaaagatgttgtt
tatgtacgcattgatcgcacacgtaagttgccggttacggttcttttgcgtgctctcggc
ttcggctccgatcaagagattcttgatcttgtaggagaaaacgaatacctgcgaaatacg
cttgataaagataacacagaaaacagcgataaagcgctgctcgaaatctacgagcgcctc
cgtcctggagagccgcctacagtggaaaatgcgaaaagcttgcttgattctcgtttcttt
gatccgaaacgatacgatcttgccaatgtaggacgctataaaattaataaaaagcttcat
attaaaaatcgcctctttaatcagagacttgctgaaacgcttgttgatcctgaaacagga
gaaatcctggctgaaaaaggtcagattcttgatagaagaactcttgataaagtactgcca
tacttagaaaacggaatcggtttcagaaagctgtatccgaacggcggtgttgttgaggac
gaagtaacgcttcaatccattaagatctttgctcctactgatcaagaaggagaacaggtt
attaatgtcatcggcaatgcttacgttgaagaagagattaaaaacattacacctgctgat
attatttcttctatcagctacttcttcaacttgctgcacggagtaggcgacacagatgat
attgaccatcttggaaaccgccgtttacgttctgtaggtgaacttctccagaaccaattc
cgtatcggtttaagccgtatggagcgtgtggttcgtgagagaatgtcaattcaagatacg
aatacaattacacctcagcagctgatcaatattcgtcctgttattgcgtccattaaagag
ttctttggaagctctcagctttctcaattcatggaccagacgaacccgcttgctgaatta
acacataagcgccgtctgtcggctcttggaccgggcggattgacacgtgagcgtgccgga
atggaagtgcgtgacgttcactactcccactatggccgtatgtgtccgattgaaacgcca
gagggaccgaacatcggtttgatcaactcactatcatcatatgcaaaagtaaaccgtttt
ggctttattgaaacgccatatcgccgcgttgatcctgaaacaggaaaagtgacgccgaga
atcgattacttaactgctgatgaagaagataactacgttgttgctcaggcaaatgcacga
ctcgatgacgaaggtgcgtttgtggatgacagcattgtagcccgtttccgcggagagaac
accgttgttcctagaaaccgtgttgattacatggatgtatcgcctaagcaggtagtatct
gctgcgacagcatgtatcccgttcttagaaaacgatgactcgaaccgtgccctaatggga
gcgaacatgcagcgtcaggctgtgcctttgatgcagccggaagcgccatttgtaggaact
ggtatggaatacgtatcaggtaaagactctggtgccgctgtgatttgtaaacaccctggt
atcgttgaacgtgtagaagcgaaaaacgtttgggttcgccgctatgaagaagtagacggt
caaaaagtaaaaggaaacctggataaatacagcttgctgaaatttgtccgctctaaccaa
ggtacttgctacaaccagcgtccgatcgtaagtgtcggcgatgaagtggtaaaaggagaa
atccttgctgacggtccttctatggagcttggtgaacttgcacttggccgtaacgtaatg
gtcggcttcatgacatgggatggctacaactatgaggatgccatcatcatgagtgaacgt
cttgtgaaagatgatgtttatacatctattcacattgaagaatatgaatcagaagcacgt
gatactaaactcgggcctgaagaaatcacccgtgatattccgaacgtcggtgaagatgcg
cttcgcaatcttgatgaccgcggaattatccgtatcggggcagaagtaaaagacggagat
cttcttgttggtaaagtaacgcctaagggtgtaacagaacttactgcagaagaacgcctt
cttcatgccatctttggtgaaaaagcccgcgaggttcgtgatacttctcttcgtgtgcct
cacggcggcggaggaattattcacgatgttaaagtcttcaaccgtgaggacggagacgaa
cttcctccaggtgtaaaccagttagtacgcgtatatatcgttcagaaacgtaaaatttct
gaaggggataaaatggccggtcgtcacggtaacaaaggtgttatttctaagattcttcct
gaagaggatatgccttatcttcctgacggcacaccaattgatatcatgcttaacccgctg
ggcgtaccatcacgtatgaacatcgggcaggtattagagcttcacatgggtatggccgct
cgttacctcggcatccacattgcgtcaccggtatttgacggagcgcgtgaagaggatgtt
tgggaaacacttgaagaagccggaatgtctcgtgacgctaaaaccgttctttacgacgga
cgtaccggagagccgtttgataaccgtgtatctgtcggtatcatgtacatgattaaactg
gctcacatggttgacgataaacttcatgcacgctctacaggtccttactcacttgttacg
cagcagcctcttggcggtaaagctcaatttggcggacagcgttttggtgagatggaggtt
tgggcacttgaagcttacggtgcagcttacactcttcaagagattctgactgttaagtct
gatgacgtggttggacgtgtgaaaacatacgaagccatcgttaaaggcgacaacgttcct
gaacctggtgttccggaatcattcaaagtattaattaaagaacttcaaagtttaggtatg
gatgtgaaaatcctttctagcgatgaagaagaaatagaaatgagagatttagaagacgaa
gaagatgcaaaacaagctgacggcctggcgttatcaggtgatgaagagccggaagaaaca
gcatctgcagacgttgaacgcgatgtagtaacaaaagaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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