KEGG   Candidatus Bipolaricaulis sibiricus: BIP78_0078
Entry
BIP78_0078        CDS       T05809                                 
Name
(GenBank) hypothetical protein
  KO
K03602  exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
Organism
bih  Candidatus Bipolaricaulis sibiricus
Pathway
bih03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bih00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    BIP78_0078
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bih03400]
    BIP78_0078
Enzymes [BR:bih01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.6  exodeoxyribonuclease VII
     BIP78_0078
DNA repair and recombination proteins [BR:bih03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     BIP78_0078
SSDB
Motif
Pfam: Exonuc_VII_S DUF1890 SlyX MscS_porin TelA HAP1_N
Other DBs
NCBI-ProteinID: QAA75846
UniProt: A0A410FS58
Position
74513..74785
AA seq 90 aa
MAKDKTVPKEKSYTEAVARLDEILNLIEEGEVDIDALSGLVTEAAELVTLCRQKITAAEV
QVREITERLEREVAESEKGQDEVPADEPPF
NT seq 273 nt   +upstreamnt  +downstreamnt
atggccaaagacaagacggttcccaaggagaagtcctacaccgaggcagtggccaggctc
gacgagattctgaacctgattgaggaaggtgaagtggacatcgacgccctgtccggcctc
gtaaccgaagccgcggagctggtgaccctgtgtcggcagaagatcacggccgccgaggtg
caggtccgggagatcacggagcgcctggagcgcgaggtggcggaatcggagaagggtcaa
gacgaggttccggcggacgaacctccgttctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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