KEGG   Bifidobacterium indicum: BINDI_0621
Entry
BINDI_0621        CDS       T03564                                 
Name
(GenBank) crossover junction endodeoxyribonuclease RuvC
  KO
K01159  crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
Organism
bii  Bifidobacterium indicum
Pathway
bii03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bii00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    BINDI_0621
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bii03400]
    BINDI_0621
Enzymes [BR:bii01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.10  crossover junction endodeoxyribonuclease
     BINDI_0621
DNA repair and recombination proteins [BR:bii03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     BINDI_0621
    RecFOR pathway proteins
     BINDI_0621
SSDB
Motif
Pfam: RuvC DUF3335
Other DBs
NCBI-ProteinID: AIC91897
UniProt: A0A087VU61
Position
complement(846634..847155)
AA seq 173 aa
MHRAGFPLFTSMWSAPTRTCPRTCVWLAIYNGLSDKIDRFSPDVISIERVFAQSNRNTVL
GTAQAAGLAMLAAAQRGIPVALHTPTEAKMAVTGNGQAEKIQVERMVARILKLDRLPQPA
DAADALAQAICHALRPAGALQGGEREEHLTPAQRQWARAAARQGNHGGVHRGM
NT seq 522 nt   +upstreamnt  +downstreamnt
gtgcatcgcgccggctttcctttattcacgtcgatgtggtccgctccgacccggacctgt
cccaggacctgcgtctggcttgccatatacaatggcctgagcgataagatcgaccggttc
agccccgatgtcatttccatcgagcgggtcttcgcccagtccaaccggaatacggttctt
ggaacagcccaggccgcaggactggccatgttggcagccgctcaacgtggcatccctgta
gccctccatacgccgaccgaggccaagatggcagtgacgggcaatgggcaggccgagaag
atacaggttgagcgcatggttgcacggatattgaagctggacaggctgccgcaaccggct
gatgcggccgacgccctggctcaggccatctgtcacgcgctccggccagcaggagcccta
cagggcggggagcgggaggaacacttgacacccgcacagcgtcagtgggcacgggcagcc
gcgcgacagggcaatcatgggggagtccacagaggaatgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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