KEGG   Bifidobacterium indicum: BINDI_0643
Entry
BINDI_0643        CDS       T03564                                 
Name
(GenBank) excinuclease ABC subunit C
  KO
K03703  excinuclease ABC subunit C
Organism
bii  Bifidobacterium indicum
Pathway
bii03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bii00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    BINDI_0643
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bii03400]
    BINDI_0643
DNA repair and recombination proteins [BR:bii03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BINDI_0643
SSDB
Motif
Pfam: UvrC_RNaseH_dom HHH_5 UVR HHH_2 GIY-YIG HHH UPF0758_N DUF4124 IMS_HHH GIY_YIG_domain
Other DBs
NCBI-ProteinID: AIC91918
UniProt: A0A087VUE8
Position
complement(871789..874200)
AA seq 803 aa
MTRSCFERHTQQVWRQTARALEAESRTGSSAGEEGPSGLNKNGAPLLGDTRDGFRPKTSD
IPTQPGVYKWRDEEGRVIYVGKAKNLRNRLTNYFQPLANLHPRTQSMVLTARSLEWTVVA
TELESLTLEYTWIKEFDPRFNVVFRDDKTYPYLAVSVGEEIPRVWMTRVRKRRDTRYFGP
YAKVWDIRHTLDGLLKTYPVRTCTSGVFRKAQLSGRPCLLASIGKCSAPCVGRISPKEHR
KLCAELTGVITGRLGKPYRANLTRQMKAASDDLDFEKAARLRDQIAMLDTVIEQNAVAFG
SNVDVDVFGVESDELEASVHAFFVRAGAIRGERNWSVERVEDVSDEDLIGDLIVQVYSDL
MNETNSELSRTAPHNEMALETPADEDSGVSISQARDAMGSTQRVTALDAEDRARATKKRN
TYQEQTGRADLLAPISPIPPEVVVPIQPSRTESLEEWLRGLRGSSVRIRVASRGEKKSLM
DRANANAHQALQRSKMSRMSDIGTRTEAMNDVARALGLDKAPLRIECYDISNTVGGQFQV
ASMVVFEDGIPKKSEYRRFAIRGKDGKGAVDDVSAVYETLTRRFRHGNIAGDSGESMEAE
RKVNQANLKGEGADRKDDLGSDTGTEEAIVQQNASAHHFAYKPNLIVVDGGKPQVLAAAK
ALHDCGVNDVALCGLAKRLEEVWVPDDDYPVILKRQSEGMYLLQRVRDESHRFAITYHRQ
ARRKGALRSALDDIPGIGKAYQKRLLNHFGSVKKMKEASLQELEGVKGIGQAKAESIYEA
LHQGEGRPTPEADSKQGQETITG
NT seq 2412 nt   +upstreamnt  +downstreamnt
atgacgcgtagctgcttcgagcgccacacccaacaggtctggcggcagactgcccgtgcg
ctcgaagccgaatcccgtaccggttcctccgcaggggaggaggggccctcgggattgaac
aagaacggcgcccccctcctcggcgatacgcgtgacggtttccgcccgaagacctcagac
atacccacccagcccggcgtctacaagtggagggatgaggaaggcagagtcatctacgtt
ggcaaggccaagaacctgcgcaaccggctgaccaactacttccagccactcgccaatctc
catccacgcacacagtccatggttctgacggccagaagtctggaatggaccgtggtggcc
accgagttggaatccctgacgctcgaatacacctggatcaaggaattcgaccccagattc
aacgtcgttttccgtgacgacaagacatacccctatttggccgtatcggtcggcgaggag
atcccccgagtctggatgactcgcgtcagaaaacggcgtgacaccagatatttcggcccg
tacgccaaggtctgggacatccgtcatacacttgatggcctcctcaagacctacccggtc
cgcacctgcacgtccggtgtctttcgcaaggctcaactcagtggtcgtccctgccttctg
gcatcgatcggcaagtgctcggccccatgtgtgggcaggatcagcccaaaggagcatcgc
aaactctgcgccgaactgaccggggtgattacaggtcgcctgggtaagccctatcgcgca
aacctaacgcggcagatgaaggcggccagcgatgaccttgacttcgagaaggccgcccgc
ctgcgggaccagatagccatgctggatacggtcattgagcagaacgcagtggccttcggc
tccaatgtggatgttgacgtcttcggcgtcgaatcggatgaactcgaagcttcggtccat
gccttcttcgttcgggcgggtgccattcgaggtgagcgtaactggagcgtggaacgggtt
gaggatgtctccgatgaggacctgattggcgaccttatcgtccaggtctattcggacctg
atgaacgagaccaacagcgagctatccaggaccgcgccccacaatgagatggctttggag
acacccgccgatgaagattcaggcgtttccatcagtcaggccagggatgccatgggatcg
acccagcgggttaccgccttggatgccgaggatagggcccgcgccacaaagaaaaggaac
acctatcaggaacagaccgggagggccgacctccttgctcccatctcacctattcctccg
gaggttgtggtccccatccagccttcccgcacggaatcccttgaagagtggttgcgggga
cttcgtgggtcctcggtcaggatacgagtggccagcaggggcgagaagaagtctctgatg
gaccgggccaatgccaatgcccaccaggccctccaacgtagcaagatgagccgtatgagc
gacatcggcacccgaacggaagccatgaacgacgttgccagggccctgggcctggataag
gcgcccctgcggatcgagtgctacgacatctccaacacggttggtggccaattccaggtg
gcctcgatggttgttttcgaggatggtatccccaagaaatccgagtatcgccgcttcgcc
attcggggaaaggacgggaagggggccgtggatgatgtgagcgccgtctacgagacactc
acccgccgcttccgccatgggaacatcgccggcgacagtggggaaagcatggaagccgag
cggaaagtcaaccaggcgaatctgaaaggggagggagccgaccggaaggatgatctgggc
agcgacaccggaaccgaggaggccatcgtccagcagaacgcctcggcgcatcactttgcc
tacaagcccaacctgattgtcgttgatggaggcaaacctcaggttttggcggcggcaaag
gccctgcatgattgcggtgtcaacgatgtggctctctgcggtctggccaagcgtcttgaa
gaggtttgggtgccggatgacgactacccggtcatcctcaaacgtcagtctgagggaatg
taccttcttcaacgggtgcgtgacgaatcccatcgattcgccataacctatcaccgtcag
gccaggcgaaagggtgctttgcgctccgcgctggatgatatcccaggcatcggaaaggcg
taccagaagcgactgctcaaccatttcggctccgtcaagaagatgaaggaggcaagtctt
caggagctggaaggcgtcaaaggcataggccaggccaaggccgaatcgatctatgaggcc
cttcaccagggggaggggcgacctactccggaagcggactccaagcaaggccaggaaacc
atcaccgggtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (18)   

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