KEGG   Bos indicus (zebu cattle): 109554334
Entry
109554334         CDS       T04792                                 
Symbol
KDM2A
Name
(RefSeq) lysine-specific demethylase 2A isoform X1
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
biu  Bos indicus (zebu cattle)
Pathway
biu03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:biu00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    109554334 (KDM2A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:biu03000]
    109554334 (KDM2A)
   04121 Ubiquitin system [BR:biu04121]
    109554334 (KDM2A)
   03036 Chromosome and associated proteins [BR:biu03036]
    109554334 (KDM2A)
Enzymes [BR:biu01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     109554334 (KDM2A)
Transcription factors [BR:biu03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    109554334 (KDM2A)
Ubiquitin system [BR:biu04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   SCF complex
    Target recognizing subunit (F-box)
     109554334 (KDM2A)
Chromosome and associated proteins [BR:biu03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    109554334 (KDM2A)
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     109554334 (KDM2A)
SSDB
Motif
Pfam: PHD_4 zf-CXXC F-box-like JHD F-box JmjC Cupin_8 LRR_4 Cupin_1
Other DBs
NCBI-GeneID: 109554334
NCBI-ProteinID: XP_019810277
UniProt: A0A6P5BCD5
Position
29:47112971..47206716
AA seq 1185 aa
MEPEEERIRYSQRLRGTMRRRYEDDGISDDEIEGKRTFDLEEKLHTNKYNANFVTFMEGK
DFNVEYIQRGGLRDPLIFKNSDGLGIKMPDPDFTVNDVKMCVGSRRMVDVMDVNTQKGIE
MTMAQWTRYYETPEEEREKLYNVISLEFSHTRLENMVQRPSTVDFIDWVDNMWPRHLKES
QTESTNAILEMQYPKVQKYCLMSVRGCYTDFHVDFGGTSVWYHIHQGGKVFWLIPPTAHN
LELYENWLLSGKQGDIFLGDRVSDCQRIELKQGYTFVIPSGWIHAVYTPTDTLVFGGNFL
HSFNIPMQLKIYNIEDRTRVPNKFRYPFYYEMCWYVLERYVYCITNRSHLTKEFQKESLS
MDLELNGLESGNGDEEAVDREPRRLSSRRSVLTSPVANGVNLDYDGLGKTCRSLPSLKKT
LSGDSSSDSSRGSQNGQVWDSQCSPRKDRQVHLTHFELEGLRCLVDKLESLPLHKKCVPT
GIEDEDALIADVKVLLEELANSDPKLALTGVPIVQWPKRDKLKFPTRPKVRVPTIPITKP
HTMKPAPRLTPVRPAAASPIVSGARRRRVRCRKCKACVQGECGVCHYCRDMKKFGGPGRM
KQSCVLRQCLAPRLPHSVTCSLCGEVDQNEETQDFEKKLMECCICNEIVHPGCLQMDGEG
LLNEELPNCWECPKCYQEDSSEKAQCSSTPWGPWKRGATARLFEEGNEKRKMEESDEEAV
QAKVLRPLRSCDEPLTPPPHSPTSMLQLIHDPASPRGVVTRSSPGAGPSDHHSASRDERF
KRRQLLRLQATERTMVREKENNPSGKKELSEVEKAKIRGSYLTVTLQRPTKELHGTSIVP
KLQAITASSANLRHSPRVLVQHCPARTPQRGDEEGLGGEEEDEEEEEEEDDSAEEGGAAR
LNGRGSWAQDGDESWMQREVWMSVFRYLSRRELCECMRVCKTWYKWCCDKRLWTKIDLSR
CKAIVPQALSGIIKRQPVSLDLSWTNISKKQLTWLVNRLPGLKDLLLAGCSWSAVSALST
SSCPLLRTLDLRWAVGIKDPQIRDLLTPPADKPGQDNRSKLRNMTDFRLAGLDITDATLR
LIIRHMPLLSRLDLSHCSHLTDQSSNLLTAVGSSTRYSLTELNMAGCNKLTDQTLIYLRR
IANVTLIDLRGCKQITRKACEHFISDLSINSLYCLSDEKLIQKIS
NT seq 3558 nt   +upstreamnt  +downstreamnt
atggaacccgaagaagaaaggattcgttacagccagagattgcgtggtaccatgcgacga
cgctatgaagatgatggcatttcagatgatgaaattgaaggaaaaagaacttttgacttg
gaagagaagctccacaccaacaaatataatgcaaattttgttacttttatggaaggaaaa
gattttaatgtagagtatatccagcggggtggcttaagagatcctctgattttcaagaat
tccgatggacttggaataaagatgccagatccagacttcactgtgaatgatgtcaaaatg
tgtgtggggagtcgtcgtatggtggatgtcatggatgtgaacacacagaaaggcattgaa
atgaccatggctcagtggacacgctactatgagaccccagaggaggagcgagaaaaactc
tataatgtcatcagcttagagtttagccacaccaggctggagaacatggtgcagaggccc
tccacggtggatttcattgactgggtagacaatatgtggccaaggcatttgaaagaaagt
cagactgaatcaacaaatgccatcttggagatgcagtatcctaaagtgcagaagtactgt
ctgatgagtgttcgaggctgctatactgacttccatgtggacttcggtggtacctctgtt
tggtatcatatccatcaagggggaaaggtcttctggctcatcccccctacagcccacaac
ctggagctgtacgagaattggctgctgtcagggaaacagggagacatctttctgggtgac
cgggtatcagattgccaacgcattgagctcaagcagggctataccttcgtcattccctca
ggctggattcatgctgtgtatactcctacagacacattggtgtttggaggcaattttttg
catagcttcaatatccccatgcagttaaagatatacaacattgaagatcgaacacgggtt
cctaataagttccgctatccattctactacgagatgtgctggtacgtgctggagcgctat
gtgtactgcataaccaaccgctctcacctaactaaggaatttcagaaagagtctcttagc
atggatttggagttaaatgggttggagtctggaaacggggacgaggaagcagtagaccga
gagccccggcgcttgagcagtagacgttctgtcctcaccagccctgtggccaatggggtc
aacctggattatgatggactgggcaaaacctgccgaagtcttccaagtctgaagaaaact
ttgtctggggactcatcctctgactctagccggggttcccagaatggccaagtgtgggat
tcccagtgtagcccccgaaaggaccgacaggtgcatctgacccattttgagcttgaaggc
cttcgttgccttgtagataaattggaatctctgccactgcacaagaaatgcgtccctaca
gggatagaagacgaagatgctctcattgctgatgtgaaggttttgctggaggaacttgcc
aacagtgatcccaagttagccctcactggagtccctatagtacagtggccgaaaagggat
aagcttaaattcccaacccggccaaaggtgcgggttcctactatccccatcacaaagcct
cacactatgaaaccagcgccgcggttaacacctgtgcgcccagccgctgcttctcccatc
gtgtctggagccagacggagacgagtgcgatgtcgaaaatgcaaagcctgcgtgcagggr
gagtgtggtgtttgtcactactgcagggacatgaagaagtttggggggcctggtcgcatg
aagcagtcctgtgttctccggcagtgcttggcacccagactgcctcactctgtcacatgt
tccctctgtggagaggtggatcaaaatgaggagacacaggactttgagaagaaactcatg
gaatgctgtatctgcaatgagattgttcatcctggctgcctccagatggatggagagggg
ttgcttaatgaggaattgccaaattgctgggagtgtccaaagtgctaccaagaggacagc
tcagaaaaagcccagtgttcttctacaccctggggcccttggaaaagaggagccacagcc
aggctgtttgaggagggaaatgagaagcggaaaatggaagagagtgacgaagaagccgtg
caagccaaagtcctccggcccctgcggagctgcgacgagcccctcacgcccccacctcac
tcgcccacctccatgctgcagctcatccacgacccggcctccccccggggcgtggtgact
cggtcatcccctggggccggccccagcgaccaccacagtgccagccgcgatgagcgcttc
aaacggcggcagttgctgcggctgcaggccacagagcgcaccatggtacgggaaaaggag
aacaatcccagcggcaaaaaggagctgtctgaagttgagaaagccaagatccggggatcg
tacctcactgtcacgctgcagaggcccaccaaagagctccacgggacatccattgtgccc
aagctgcaggccatcacggcctcctctgccaaccttcgccattccccccgtgtgctggtc
cagcactgcccagcccgaaccccccagcgcggggatgaggaggggctggggggagaggag
gaggacgaggaggaggaggaggaggaagatgacagtgcagaggaggggggtgcggccagg
ctgaatggccggggcagttgggctcaggatggagacgaaagctggatgcagcgggaggtc
tggatgtctgtcttccgctacctcagccgcagagaactttgtgaatgtatgcgagtgtgc
aagacgtggtataaatggtgctgcgacaagagactttggacaaaaattgacttgagtagg
tgtaaggctattgtaccccaggctctcagtggcatcatcaagaggcagccagttagcctt
gacctcagttggaccaacatctccaaaaaacagctgacatggctcgtcaataggctgcca
ggactgaaagacctcctcctagcaggctgctcctggtctgcagtctctgccctcagcacc
tccagctgcccccttctcaggacccttgatcttcggtgggcagtaggaatcaaggaccct
caaattcgggacttgctgactccaccggcggataaaccgggccaggacaatcgcagcaag
ctccggaacatgaccgacttccggctggcaggccttgacatcacagacgccacgcttcgt
ctcatcattcgccacatgcccctcctgtctcgactcgacctcagtcactgcagccacctg
acagaccagtcctccaatctgctcaccgctgttgggtcttccactcgttactccctcaca
gagctcaacatggcaggttgcaataaactgacagaccagaccctgatctacctacggcgc
atcgccaacgtcaccttgatcgaccttcgaggatgcaagcagatcactcgaaaagcctgc
gagcacttcatctcagacttgtccatcaacagtctgtactgcctgtctgacgagaagctg
atacagaagatcagctaa

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