KEGG   Bos indicus (zebu cattle): 109556215
Entry
109556215         CDS       T04792                                 
Symbol
USP1
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 1
  KO
K11832  ubiquitin carboxyl-terminal hydrolase 1 [EC:3.4.19.12]
Organism
biu  Bos indicus (zebu cattle)
Pathway
biu03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:biu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    109556215 (USP1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:biu01002]
    109556215 (USP1)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:biu04121]
    109556215 (USP1)
   03400 DNA repair and recombination proteins [BR:biu03400]
    109556215 (USP1)
Enzymes [BR:biu01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     109556215 (USP1)
Peptidases and inhibitors [BR:biu01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   109556215 (USP1)
Ubiquitin system [BR:biu04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    109556215 (USP1)
DNA repair and recombination proteins [BR:biu03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     109556215 (USP1)
SSDB
Motif
Pfam: UCH UCH_1
Other DBs
NCBI-GeneID: 109556215
NCBI-ProteinID: XP_019812904
UniProt: A0A6P5BP48
Position
3:complement(89399053..89411339)
AA seq 783 aa
MPGVIPSESNGLSRGSPSKKNRLSLKFFQKKETKRALDFTDSQENEEKTSEYKGSEIDQV
VPAAQSSPINCEKRENLLPFVGLNNLGNTCYLNSILQVLYFCPGFKSGVKHLFNIISRKK
EALKDEANQKDKGNCKEDSLASYELICSLQSLIISVEQLQASFLLNPEKYTDELATQPRR
LLNTLRELNPMYEGYLQHDAQEVLQCILGNIQETCQLLKKEEVKNVEDLSTKVEEYQKEE
MSDNNSMEMDNMRHSEDYKEKLSKGNGKRKSDAEFGNMKKKVKISKEHQSSEENQRQTRS
KRKAAGDTLEISHKIIPKHISENESTRPSQRKSKVKINWLKSAAKQPSILSKFCSMGKIA
TNQGSKGHCKENEYDLEEDLGKYENDNTTNGCELESPGNNDMPINVNEVKPINKGAEQIG
FELVEKLFQGQLVLRTRCLECESLTERREDFQDISVPVQEDELSKVEENSEISPEPKTEM
KTLRWAISQFASVERIVGEDKYFCENCHHYTEAERSLLFDKMPEVITIHLKCFAASGLEF
DCYGGGLSKINTPLLTPLKLSLEEWSTKPTNDSYGLFAVVMHSGITISSGHYTASVKVTD
LNSLELDKENFVIDQTCEIGKPEPLNEEEVRGVVENYDNEEVSIRVSGNNQPSKVLNKKN
VEAIGLLGGQKSKADYELYNKASNPDKVASTALPENRNSETNNTNGTDESDSNKESSDQT
GINISGFENKISYVVQSLKEYEGKWLLFDDSEVKVTEEKDFLNSLSPSTSPTSTPYLLFY
KKL
NT seq 2352 nt   +upstreamnt  +downstreamnt
atgcctggtgtcatacctagtgaaagtaatgggctttcaagaggtagtccatcaaaaaaa
aacagactttccttgaagttttttcagaaaaaggaaaccaagagagccttggatttcaca
gattctcaagaaaatgaagaaaagacttctgaatataaagggtctgaaattgatcaagtt
gttcctgcggcacagtcctcgcctataaactgtgagaagagagaaaacttgctaccattt
gtgggactgaataatctcggcaatacttgttatcttaatagtatacttcaggtattatat
ttttgtcctggttttaaatctggagtgaagcacttatttaatattatttcaaggaagaaa
gaagccctaaaagatgaagccaatcaaaaagataagggaaactgcaaagaagattctttg
gcaagttatgaactaatatgcagcttacagtccttgatcatttcagttgaacagcttcag
gctagttttctattaaatccagaaaagtacactgatgaacttgctactcagccaaggcga
ctacttaacacactcagggaactcaaccctatgtatgaaggatatctacagcatgatgca
caggaagtattacagtgtattttgggaaacattcaagaaacatgccaactcctaaaaaaa
gaagaagtaaaaaatgtagaagacttatctactaaggtagaagaatatcagaaagaggaa
atgagtgataataacagcatggagatggacaatatgaggcattctgaagactataaagaa
aaactctcaaaaggaaatgggaaaagaaaaagtgatgctgaatttggtaacatgaaaaaa
aaagttaaaatctccaaggaacaccagtcttcggaagaaaaccagagacaaaccagatca
aaaagaaaagctgcaggtgatacattagagatttctcataaaataatccccaagcacatt
tctgaaaatgagagtacaagaccctcccaaaggaaatcaaaagttaaaataaattggtta
aagtctgcagctaagcaacccagcattctttccaagttctgtagtatgggtaaaatagca
acaaaccaaggatccaaaggacactgtaaagaaaatgaatatgatcttgaagaggacttg
gggaagtatgaaaatgataatacaactaatggttgtgaacttgagtctccaggaaataat
gatatgcccattaatgttaatgaagttaagcccataaacaaaggtgcagagcaaattggt
tttgagctagtggagaaattatttcaaggtcagctggtattacggactcgttgcttagaa
tgtgaaagtttaacagaaagaagagaagattttcaagacatcagtgtaccagtgcaagaa
gatgagctttccaaagtagaggagaattctgaaatttctccagagccaaaaacagaaatg
aagaccctgagatgggcaatttcacaatttgcttcagtggaaaggattgtaggagaagat
aaatatttctgtgaaaactgccatcattatactgaagcggaacgaagtcttttgtttgac
aaaatgcctgaagttataactattcatttgaagtgctttgctgctagtggcttggagttt
gactgttatggtggtggactttccaagatcaacactcctttactgacacctcttaaattg
tcactagaagaatggagcacaaagccaaccaacgacagctatggattatttgcagttgtg
atgcacagtggcattacaattagtagtgggcactatactgcttctgttaaagtcactgac
cttaacagtttagaactagataaggaaaattttgtgatcgaccaaacgtgtgaaataggt
aagccagaaccattgaatgaggaggaagtaaggggtgtggttgaaaattatgacaatgaa
gaagtgtctattagagtcagtggaaataaccagccaagtaaagttttgaacaaaaaaaat
gtagaagctattggacttcttggaggacaaaagagcaaggcagattaygagttatacaac
aaagcgtctaaccctgataaagttgccagtacagcacttcctgaaaatagaaattccgag
actaacaatactaatgggaccgatgaatctgatagtaacaaggaatccagtgaccaaaca
ggcattaacattagtggttttgagaacaaaatttcatatgtagtgcaaagcttaaaggag
tatgaggggaaatggttgctttttgatgattctgaagtgaaagttactgaagagaaggac
tttttgaattctctttccccttctacatctcctacatctactccttacttgctattttat
aagaaattatag

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (17)   

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