KEGG   Bos indicus (zebu cattle): 109557548
Entry
109557548         CDS       T04792                                 
Symbol
POLM
Name
(RefSeq) DNA-directed DNA/RNA polymerase mu isoform X1
  KO
K03513  DNA polymerase mu [EC:2.7.7.7]
Organism
biu  Bos indicus (zebu cattle)
Pathway
biu03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:biu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    109557548 (POLM)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:biu03400]
    109557548 (POLM)
Enzymes [BR:biu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     109557548 (POLM)
DNA repair and recombination proteins [BR:biu03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    X-family DNA polymerases
     109557548 (POLM)
SSDB
Motif
Pfam: DNA_pol_B_thumb DNA_pol_lambd_f HHH_8 DNA_pol_B_palm NTP_transf_2 BRCT PUF Phage_Nu1 Sigma54_AID
Other DBs
NCBI-GeneID: 109557548
NCBI-ProteinID: XP_019814517
UniProt: A0A6P5BKF4
Position
4:79905060..79913406
AA seq 488 aa
MLPKRRRARVASPSAAPSSSARFPGVTIYLAEPHMGRSRQAFLTRLAVSKGFRVLNAYSP
EVTHVVMEGTSAEEAVCWQERKMSVLPPGCTRPAVLDISWFTESMAAGQPVPVECRHRLE
VAVPKKKMPSPAWMLPYACQRPTPLVHHNASLSEALETLAEAAGFDGSEGRQIAFYRAAS
VLKALPSPVTALSQLQGLPHFGEHSCRVVQELLEHGVCDEVERVRLSERYQTMKLFTQIF
GVGVRTADQWYRKGLRTLADLREESQRLTQQQKAGLQHHQDLSAPILRSDVEALQQEVEA
AVRQALPGATVTLAGGFRRGKLQGHDVDFLITHPQEGQEAGLLPRVMCYLKKQGLVLYHQ
HQHSQQGDLTQQSHTMDAFERSFCIFRLPQPPGAAVGGAQKPCYAWKAVRVDLVVAPISQ
FPFALLGWTGSKHFERELRRFSRKERGLCLNSHGLFDPEQKTVFHVASEEDIFRLLDLEY
LPPELRNA
NT seq 1467 nt   +upstreamnt  +downstreamnt
atgctaccgaaacgacggcgagcacgggtcgcgtcccccagcgccgccccctcctcctcg
gcgcgcttcccgggggtcactatctacctggccgaaccacacatgggccgcagtcgtcag
gcttttctcacacgcctggctgtctccaagggtttccgcgtcctgaatgcctacagccca
gaggtgacacacgtggtgatggaggggacctcagcagaggaggctgtctgctggcaggag
cgcaagatgtcggttcttcccccaggttgtacccgcccagctgttttagayataagttgg
ttcacagagagcatggcagctgggcagcctgtgcctgtggaatgccggcaccgcctggag
gtggctgtgcccaaaaagaagatgccaagcccagcatggatgctgccctatgcctgccag
cgtcccacacccctcgtgcaccataatgccagtctctcggaggctctggagacgctggca
gaggccgctggcttcgatggcagtgaaggccgccagatcgccttctacagagcggcctcg
gtgctcaaggcyctccccagcccggtcacagccctgagccagctgcagggcctgccccac
ttcggagaacactcctgcagggttgtccaggaactgctagaacacggagtgtgtgatgag
gtggagagagtccggctctcggagaggtaccagaccatgaagctcttcactcagatcttt
ggggtcggggtaaggactgctgaccagtggtaccgaaaagggctccggacgctggccgac
ctccgagaggagtcccagagactaacccagcagcagaaagcaggactgcagcaccaccag
gacctgagtgccccratcctgcggtcagatgttgaggccctgcagcaagaggtggaggca
gccgtgaggcaggcccttcctggggctactgttacgctggccggaggcttccggaggggg
aaattgcagggccacgacgtggacttcctcatcacccacccccaggagggccaggaggca
gggctgctgcccagagtgatgtgctacctgaagaagcagggccttgtcctgtaccaccag
caccagcacagccagcagggagacctgacccagcagagccacaccatggatgcctttgag
aggagtttctgcattttccgcctgccgcaacccccaggggctgctgtaggtggcgcccag
aagccctgctatgcytggaaggctgtgcgggtggacctggtggttgcccctatcagccag
ttcccctttgccctgcttggctggactggctccaagcattttgagcgggagctacgccgc
ttcagcaggaaggagaggggcctctgtctgaacagccatggtctatttgatcctgagcag
aagacggttttccacgtggcctctgaggaagacatcttcagactcctggaccttgagtac
cttcccccagagctgagaaatgcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (9)   
   Pfam (9)   
All databases (26)   

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