KEGG   Bos indicus (zebu cattle): 109557903
Entry
109557903         CDS       T04792                                 
Symbol
FAM188B
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAM188B
  KO
K22647  ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:3.4.19.12]
Organism
biu  Bos indicus (zebu cattle)
Brite
KEGG Orthology (KO) [BR:biu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:biu04121]
    109557903 (FAM188B)
Enzymes [BR:biu01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     109557903 (FAM188B)
Ubiquitin system [BR:biu04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   MINDY
    109557903 (FAM188B)
SSDB
Motif
Pfam: MINDY-3_4_CD
Other DBs
NCBI-GeneID: 109557903
NCBI-ProteinID: XP_019814996
UniProt: A0A6P5BD89
Position
4:complement(67955090..68073578)
AA seq 955 aa
MDTLFVEEVAASLIREFLSRKGLKKTYVTMDQERPRSDLSINSRNDLRKVLHLEFLYKEN
KAKENPLKTNLELITRYFLDHFGNIGNNVTQETRIPELSXPKKSNKLPLRSSETTLVNIY
HLADEDEXWRTSLSEISKARHDSLDGDVLGXFVSSKRSSHKSRPIKTVAGESPTVXSAWE
KTDKLPMSEPSLDTKRMGEKVRPKSGLIVRGMMAGPIASSPQDSLRKRSLRRSPALSSAT
QPHKEGSPQEPELSTHTSTCPTPLEGPASSTASTSRSPQGPLSELTWEKQRTSPGSPPHL
PGKGLLPRGSGRWRDLSEDSPAVDSGSEAIRTPPKFSLSSGNVPKTQERPERAFERQGSQ
PASLRKNQLSVSNKLXGDLDVLQLEDVEDELVREEIILSPVSSVLKLQVVSKPIDLSVAK
DIKTILFGSSFCCFSDEWKLQSFSFNDSVSLKYGIVQNKRRRVPGQPERPGRGWRQEAKC
HGLKTPEGWAPDRLSDEVDSGPQPVLPKCRVLMPNVKWGHFHKDNNQKVXFNEASSTLQA
LAVDLTHIISSAVSGARVSGLAQLGWSGRASVWGGSSSGPSLPGSVRTRXLFLHAPLGPA
KSPEAPLLPWVIFSACSSSSPAGAPFLSALFLVLICGGPSPRFCLSPLGGRGKRTGPLPH
GCVXCNFCHYRPKLXSLSVLRLQPSNARRTHCLALAIADIVWRAGGCERAVVTLASGTQH
FSPTGKYKADGVLETLILHSLTCYEELVTFLQQSIHQFEAGPYGCVLLTLSAILSRSTEL
VRQDFDVPTSHLIGAHGYCTQELVNLLLTGKAVSNVFNDVVELDSGNGDVTLLKGISTRS
DIGFLSLFEHYNVCQVGCFLKTPRFPIWVVCSESHFSVLFSQQLELLRDWRAERLFDLYY
YDGLANQQEQIRLTVDTTQTVPEDRDNGLVPPLELCIRTKWKGASVNWNGSEPIL
NT seq 2868 nt   +upstreamnt  +downstreamnt
atggacaccctcttcgtggaggaggtggcggcctccctgattagggagttcctcagcagg
aagggcttaaagaagacgtatgtgaccatggaccaggaacgcccacgctccgatctcagc
ataaacagcagaaacgatctccgaaaggttttgcatcttgaattyctctacaaggagaac
aaggcaaaggaaaatcctctaaaaacaaaccttgaactcattaccagatactttctggat
cactttggaaatattggtaacaatgttactcaagaaacamggatccccgaactctcagka
ccaaagaaaagtaacaaattaccattgagaagctcagagaccactctggtaaacatatac
caccttgcagatgaagatgagasttggagaacatcattgtcagaaataagcaaagccaga
cacgacagtcttgatggggatgtacttggtcrttttgtatcatccaaaaggtcctcacac
aaaagtaggccyataaagactgtcgcaggtgaaagccccactgtggyttctgcttgggag
aagacggacaagcttccaatgtcagagccttccttggacacgaagaggatgggagagaag
gtcaggccaaagtctggcctgattgtccgaggcatgatggccgggcccattgccagctcc
ccacaggattccctccgcaaacgctcgctgaggcggtccccggccttgagcagtgctacc
cagcctcacaaggaagggagcccacaagagcccgagctctctactcacacctccacctgt
cccacccctctggagggaccagcttccagcaccgcctccacctctaggagccctcagggc
ccgctcagcgagctaacctgggaaaagcagagaacctcgcctggcagcccgcctcaccta
ccaggcaaagggctgctccccagggggagtggcaggtggagagacctttctgaagacagt
ccagctgtggacagtggctcagaggccatcagaacccccccgaagttctccctgtccagt
gggaatgtcccgaagacgcaggagaggccggagagagcgttcgaacggcaggggagccag
cccgcatccctcaggaaaaatcagttgtcagtgtccaacaagctcragggtgatctggat
gtgctgcagcttgaggatgtggaagatgaattggtaagggaagaaatcatcctgtctcca
gtctcatcagtgctcaagctgcaagtagtatccaagcccatcgacctctcggtggcgaag
gacataaagaccattctgtttggttccagcttttgctgtttcagcgatgagtggaaactt
cagagtttttcctttaatgactcagtatccttaaaatatggcattgtgcagaacaagaga
cgcagagtaccaggacagccagagaggccaggaaggggctggcgccaggaggccaagtgt
catgggcttaaaacacccgagggctgggccccagacagactcagtgatgaagttgacagt
ggcccgcagccagtgcttcccaagtgtcgggtgctgatgccaaatgtcaagtggggacac
ttccataaagacaacaatcaaaaggtacyrtttaacgaagcatcctccacactccaggca
ctggccgtggacctgacgcacatcatctcatccgctgtctccggggcycgggtgtcagga
ctggcccagctggggtggtcagggcgtgcctctgtgtggggtggcagcagttctgggccc
agtctyccaggctctgtcagaactcgcagscttttcttgcacgcacctctgggccctgcc
aagtctccagaagcccctttgctcccgtgggtgattttctcagcctgctcctcctccagc
cctgctggggcccccttcctctcggctcttttcttggtcctcatctgcggaggccccagt
cccaggttctgtctgagtcctctgggtggcagaggaaaaaggacaggccctctgcctcac
ggctgtgtcrtctgtaacttctgccactacaggcctaagctcgyttccctttctgtcctc
aggctgcagccttcaaacgctcgcaggacccattgcctggccttggccattgcagacatt
gtgtggagggctggcggctgcgagagagccgtggtcacactggcttcgggaacacagcac
ttcagtccaacagggaaatacaaagcagatggagtcttagaaacactcatcctccacagt
ttgacctgctatgaggagctggtgacttttcttcagcagagcatccatcagtttgaagca
ggcccttacggatgtgtcctgctcaccctgtcggccatcctgtccagatccacagagctt
gtccgccaggacttcgacgtccccaccagccacctgattggagcacacggatactgcacg
caggaacttgtcaatctgctcctgaccgggaaggctgtgtccaatgttttcaacgacgtg
gtggagctggattctgggaacggggacgtcacgctcctcaaaggcatctccacacgcagt
gacataggcttcctgtccctctttgagcactacaatgtgtgccaggtgggctgcttcctg
aagaccccgaggttccccatctgggtggtgtgcagcgagagccacttcagcgtcctcttc
agccagcagcttgagctgctgcgagattggagggctgagcggctcttcgacctatactac
tatgatggcctggccaaccagcaggagcagatccggctgaccgtcgacaccacccagacc
gtccctgaggacagagacaacggcctcgtccctccccttgagctctgcatcagaaccaag
tggaagggggcatcagtgaactggaacggctcggaacccatcctgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (40)   
   KEGG ORTHOLOGY (1)   
   RefGene (36)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (49)   

Download RDF
DBGET integrated database retrieval system