KEGG   Bos indicus (zebu cattle): 109563109
Entry
109563109         CDS       T04792                                 
Symbol
PDLIM2
Name
(RefSeq) LOW QUALITY PROTEIN: PDZ and LIM domain protein 2
  KO
K23353  PDZ and LIM domain protein 1/2/3/4
Organism
biu  Bos indicus (zebu cattle)
Pathway
biu04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:biu00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    109563109 (PDLIM2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:biu04990]
    109563109 (PDLIM2)
Domain-containing proteins not elsewhere classified [BR:biu04990]
 LIM domain-containing proteins
  PDZ-LIM family proteins
   109563109 (PDLIM2)
SSDB
Motif
Pfam: PDZ DUF4749 PDZ_6 LIM PDZ_2 RunxI
Other DBs
NCBI-GeneID: 109563109
NCBI-ProteinID: XP_019821876
UniProt: A0A6P5C881
Position
8:72980903..72995230
AA seq 564 aa
MGLPQRGRLQPLGGSRESSPGPPAGAGQVAAPGLGCTEEAASPARGXXWGGGRGGPGITW
VEAGLGVPGGLSPESGRRRRRRRERRLSLPPSFPSLRSRALPPSPTGEREPGERTHLCSG
RMAGVLPGPGALAVLCARGSLGARTSLRTAAPRSLACGRFPAWSWAFSSRALLLQPPGAP
VLWSQNLEGAXTGRAGPTGWALLSCPGAESTDQLKGMALTVDVVGPAPWGFRISGGRDFH
TPIMVTKVTERGKAEAADLRPGDIIVSINGESAKDMLHAEAQSKIRQSPSPLRLQLDRPQ
AASPGQANGESSXEVLATRFQSSRRTHTDSQASLSPRPCSPFFTLPPTSPQAPTGEVVTS
HSFQSLAYSLEPASADHLYYGGRRGSRQASLAPAGDSAVLVLPPPPSPGARSSSSRLSXV
SEGESHLLREDSEVFKMLQENREARMAPRQSSSFRLLQEALEAEERGGTPAYLPSSLSPQ
SSLPTSRALASPPKLHTCEKCNTSIANQAVRIQEGRYRHPGCYTCADCGLNLKMRGHFWV
GDELYCEKHARQRYSAPPTLNSQA
NT seq 1695 nt   +upstreamnt  +downstreamnt
atggggctaccccagagaggacggctgcagcctctagggggctctcgggagagtagcccc
gggcccccagcgggcgcgggccaggtggcagcgcccgggctgggctgcacggaggaggcg
gcctccccggccaggggcgannnctggggcggcggcaggggcggccctgggatcacatgg
gtggaggcaggtctcggagtcccgggcgggctctcccctgagtcaggcagacggcggcgg
cggcggcgggagcggcggctttccttgcctccctccttcccttcccttcgctctcgggcc
ttgccgcccagcccgacaggtgagcgggagccaggtgagcgcacccacctgtgctcgggg
cgcatggctggcgtcctccccggccccggcgccttggccgttctgtgcgcccgcggctcc
ctgggtgcccgaacctctctgcgcacggccgctccccgcagcctcgcctgcggtcggttc
cccgcctggagctgggctttctcctcccgggcgctcctactccagcccccaggcgcaccg
gtactttggtctcagaacttagaaggagcctgaactgggcgagccgggccgacgggctgg
gcacttcttagctgccccggcgcagagtccactgaccagctcaaaggtatggcactgacg
gtggatgtggtggggccagcgccctggggcttccgaatctctgggggcagggacttccac
acgcctatcatggtgaccaaggtaactgagcggggcaaggccgaggctgctgacctccgg
cctggtgacattattgtgtccatcaacggtgagagtgcaaaggacatgcttcacgccgag
gcccagagcaagattcgccagagcccctcacccctgaggctgcagctggaccggccccag
gctgcctctcccgggcaggcyaatggggaaagctcccyggaagtgctggccactcgcttc
cagagctccaggaggacacacactgacagccaggcctccctcagcccccgaccatgcagc
cccttcttcaccctgcccccgaccagcccccaggctcccactggagaggtggtgaccagc
cacagtttccagagcctggcgtactccctggaacctgcttctgctgaccacttgtactat
gggggccgccgtggaagccgacaggcatcactggcccctgctggcgactcagcggtgctg
gtactgccgccaccgccctccccgggtgcccgttcctccagctccaggctcagtgyggtc
tcagaaggcgaaagccacctcctgagagaggactcagaagtcttcaaaatgctgcaagaa
aaccgcgaggcacgaatggccccccggcagtccagctccttccggctcctgcaggaagcc
ctagaagctgaggagagaggtggaacacctgcctatctgcccagctcgctgagtccgcag
tcctccctgcccacctccagggctctggccagcccacccaagctccacacgtgtgagaaa
tgcaacaccagcatcgcgaaccaggccgtccgtatccaggaggggcggtaccgccatcct
ggctgctacacctgtgctgactgcgggctgaacctgaagatgcgagggcacttctgggtg
ggggacgagctgtactgcgagaagcatgcccgccaacgctactctgcacccccmaccctc
aattcccaggcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (39)   

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