KEGG   Bos indicus (zebu cattle): 109564806
Entry
109564806         CDS       T04792                                 
Symbol
ACIN1
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus isoform X1
  KO
K12875  apoptotic chromatin condensation inducer in the nucleus
Organism
biu  Bos indicus (zebu cattle)
Pathway
biu03013  Nucleocytoplasmic transport
biu03015  mRNA surveillance pathway
biu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:biu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109564806 (ACIN1)
  09122 Translation
   03013 Nucleocytoplasmic transport
    109564806 (ACIN1)
   03015 mRNA surveillance pathway
    109564806 (ACIN1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:biu03019]
    109564806 (ACIN1)
   03041 Spliceosome [BR:biu03041]
    109564806 (ACIN1)
Messenger RNA biogenesis [BR:biu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     109564806 (ACIN1)
Spliceosome [BR:biu03041]
 Complex C
  Other components
   EJC/TREX
    109564806 (ACIN1)
SSDB
Motif
Pfam: RSB_motif SAP RRM_1
Other DBs
NCBI-GeneID: 109564806
NCBI-ProteinID: XP_019823901
UniProt: A0A6P5CDI6
Position
10:22052327..22090872
AA seq 1334 aa
MCRRKHPSTSGGTRGALSGNRGVDYGSGRGQLGTFEGRWRKLPKMPEAVGTDPSTSRKMA
ELEEVTLDGKPLQALRVTDLKAALEQRGLAKSGQKSALVKRLKGALMLENLQKHSTPHAA
FQPNSQIGEEMSQNSFIKQYLEKQQELLRQRLEREAREAAELEEASAESEDEMIHPERVA
SLLPPDFQSSLERPELELSRHSPRKSTSXSEEKGESDDEKPRKGERRSSRVRQARAAKLS
ECSQAAEEEEDQETPSRNLRVRADRNLKTEEEEEEEEEEEEEEEEEDDDDEGQKSRDAPV
LKQFKEEGEEIPIVKVEEVTDERPQTIRSQEQEGLERGGRVTRSQEEARRSHLARHQQEK
EMKTASLEEEREIKSSKGLEEKSKSPSPPQLTEDVAKAPVVLQPELTASEEETPPPLLTK
EASSPPPNTQLQSEEEIEPMEGPAPPVLIQLSPPNADAEARELLLSQHTVQLVGSLSPLS
GPADTKVESPVEKVPEESVLPLVQKSXQAESSAQKGLETESEKSTQPLPLKIEEFTLAKG
ITEESLEQKEGRRASHALLPSHRLKQSADSSSSRSSSSSSSSSRSRSRSPDSSGSQSHSP
PRSKQRDGSGVRAHANPHDRSKVGSRSTSESRSRSRSRSRSASSNSRKSLSPGVSRDSST
SYTETKDPSSGQEVAAPPLPQLQVLEPKERTSTPSSVQVRLVSQPEPAAKHVTQRLQPDR
GSPKKCEAEEAEPPAATQPQTSETPTSHLPESERIHHTVEEKEEVTMDTSENRPENEVPE
PPMPIADQVSNDDRPEGNAEDEEKKESLLPKSFKRKISVVSATKGVPAGNSDTEGGQPSR
KRRWGASTATTQKKPSISITTESLKSLIPBIKPLAGQEAVVDLHADDSRISEDETERNGD
DGTHDKGLKICRTVTQVVPAEGQENGQREEEEEEKEPEAEAPVPPQVSVEVALPPPVEHE
VKKVTLGDTLTRRSISQQKSGVSITIDDPVRTAQVPSPPRGKISNIVHISNLVRPFTLGQ
LKELLGRTGTLVEEAFWIDKIKSHCFVTYSTVEEAVATRTALHGVKWPQSNPKFLCADYA
EQDELDYHRGLLVDRPSETKTEEQGMPRPLHPPPPPPAQPPQHPRAEQREQERAVREQWA
EREREMERRERTRSEREWDRDKVREGPRSRSRSRDRRRKERAKSKEKKSEKKEKAQEEPP
AKLLDDLFRKTKAAPCIYWLPLTDSQIVQKEAERAERAKEREKRRKEQEEEEQKEREKEA
ERERTRQLEREKRREHSRERDRERERDRERDRGDRDRERDRERERGRERDRRDTKRHSRS
RSRSTPVRDRGGRR
NT seq 4005 nt   +upstreamnt  +downstreamnt
atgtgtagacggaaacacccgagcacttccggaggaacccggggagctctgagtggtaat
cgaggggttgactatggcagtgggcggggccaactcggtacgttcgaagggcgttggcgg
aaattaccgaagatgcccgaagccgtcgggacggacccgagtacctcacgcaagatggcg
gagctggaggaggtgactctggacgggaagcctcttcaggcgctgcgggtgaccgacctg
aaggccgcactggagcagcgaggcctagccaagagcgggcagaagagtgccctggtcaag
cggctcaaaggggctctaatgctagaaaatttacaaaaacactcaaccccgcatgctgca
ttccagccaaattcccagattggcgaggaaatgagccagaacagtttcataaagcagtat
ctggaaaagcagcaggagctgcttaggcagcgtttggaacgtgaagctcgagaagctgca
gaacttgaagaagcttcagctgagtcggaggacgagatgatccatcccgagagagtggct
tccctgctgcctcctgactttcagagcagcctggagagaccagagctggagctcagcaga
cattcacccagaaaaagcacctctstttctgaagagaaaggtgaatctgatgatgagaaa
ccaaggaaaggagaaagacgatcatccagagtcagacaggcaagagcagctaaactctcc
gagtgtagccaggctgcagaggaggaagaggatcaagaaacaccttctagaaatctgagg
gtcagagcagatcgaaatttgaaaacagaggaggaagaagaagaggaggaggaagaggaa
gaagaggaggaagaggaagatgatgatgatgagggacaaaaatctagagatgcaccagtc
ytgaaacagtttaaggaagagggagaagagatacccatagtaaaagtggaggaggtgaca
gatgagagaccccaaactataagatcccaggaacaggaggggttagagagaggagggaga
gttacaaggtcccaggaagaggcccgaagaagtcatctagccagacatcagcaggagaaa
gagatgaaaacagcttctcttgaagaagaaagagaaataaaatcttcaaaaggcttggag
gaaaaatccaagtctccttcccctcctcaattgactgaagatgtggcgaaggccccrgtt
gtgctacaaccagaactaactgccagtgaggaggagactcccccacctttacttaccaag
gaagcatcttctccaccacctaatacacagctccagagtgaagaagaaatagagcccatg
gaaggcccggcccctcctgtccttattcagttatctcctcctaatgcagatgctgaggcc
agggagctattactatctcagcatactgtgcagttggtgggaagtttgtctcctttgtca
ggtcctgcagacaccaaagttgaatctccagtagagaaagtgccagaggagagtgtcctg
cctctagttcagaaaagcrcacaagctgaatcctcagcccagaaaggtcttgaaactgaa
tcagaaaaatccactcaaccactccctctaaaaattgaggaattcacgctggccaaaggg
atcactgaggaatctttggaacagaaagaaggcaggagggcttctcatgcccttcttcca
agccacagattgaaacagtcagctgactcctcctctagccgatcctcctcatcttcatcc
tccagttctaggtcaagatctcgctctcctgacagttcaggctctcagtctcactcacct
ccaagatccaagcagagagatggatctggggtacgtgctcatgccaaccctcatgataga
tccaaggtgggctccagatcaacatcagagtccaggtcacgttcccgttctcgttcccgg
tcagcatcaagcaacagcagaaaatctttgagccctggagtctctagggacagcagcacc
agctacactgaaaccaaagatccctcttctggtcaggaggttgcagctccaccattgcca
caactgcaggtccttgagccaaaggagaggacttccaccccatcctctgtccaagtgagg
cttgtgagccaacctgagccagctgcaaagcatgtgacccagaggttacagcctgatcgg
gggagcccaaagaagtgtgaagctgaagaggcagagccaccggctgccacacagccccaa
acctcagagactccgacctctcacctaccagaatcagaaaggattcatcacactgttgag
gagaaggaggaagtgaccatggacacaagtgaaaacagacctgaaaatgaggttccagag
ccccccatgcctattgcagaccaagtcagcaatgatgatcgcccagagggcaatgctgag
gatgaggagaagaaagagagcttgctgcccaaatcattcaagaggaagatctccgttgtc
tcagctaccaagggggtgccggctggaaacagtgacacagaggggggccagcctagtcgg
aagcggcgttggggagccagcacagccaccacccagaagaaaccctccatcagtatcacc
actgaatcactcaagagcctcatccccracatcaaacccctggcggggcaggaggctgtt
gtggatcttcatgctgacgactcccgaatctctgaggatgagacagagcgtaatggtgat
gatgggacccatgacaaggggctgaaaatatgccggactgtcactcaggtggtacctgcc
gagggccaggagaatgggcagagggaagaggaggaagaagagaaggagcctgaagcagaa
gcccctgtgcctccccaggtctcagtagaggtggccttgcccccccctgtggaacatgaa
gtcaagaaagtgactttaggagataccttaactcgacgttccattagccagcagaagtca
ggagtttccattacgattgatgacccagtccggactgctcaggtgccctccccaccccgg
ggcaagatcagtaacatcgtccacatctccaatttggttcgtcccttcactttaggccaa
ctgaaggagttgttgggacgtacaggaactctggtagaagaggctttttggattgacaag
atcaaatctcactgctttgtaacgtactcaacagtagaggaagcagttgccacccgcaca
gctctccatggggtcaaatggccccagtccaaccccaaattcctttgtgctgactatgct
gagcaagatgagctggactatcaccgaggcctcttggtggaccgtccctctgaaactaag
acagaggagcaggggatgccacggccactgcaccccccgcccccacccccagcccagcca
ccacagcaccccagagcagagcagcgggagcaggagcgggcggtacgggagcagtgggca
gaacgggaacgggaaatggagcggcgggagcggactcgatctgagcgcgaatgggatcgg
gacaaagttcgagaagggccccgatcccgatcccggtcccgtgatcgccgccggaaggaa
cgcgcaaagtctaaagaaaagaagagtgagaagaaagagaaagctcaggaggaaccacct
gccaagctgctggatgaccttttccgcaagaccaaggcagctccctgcatctattggctc
ccactgactgacagccagattgttcagaaggaggcagagcgggctgaacgggccaaggag
cgggagaagcggcgaaaggagcaagaagaagaagagcagaaggagagggagaaggaggca
gagcgggaacggacccggcagctggagcgagagaagcggcgagaacacagccgagagagg
gacagggagagagagagggaccgggagcgggacaggggggatcgagatcgggagcgggac
agggagcgggaacgaggcagggagagggaccgcagagacaccaagcgccacagcaggagc
cggagcaggagcacacctgtgcgggaccggggcgggcgccgctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (9)   
   UniProt (1)   
   RefSeq(pep) (8)   
DNA sequence (10)   
   RefSeq(nuc) (8)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (33)   

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