KEGG   Bos indicus (zebu cattle): 109565775
Entry
109565775         CDS       T04792                                 
Symbol
OTX1
Name
(RefSeq) homeobox protein OTX1 isoform X1
  KO
K09326  homeobox protein OTX1
Organism
biu  Bos indicus (zebu cattle)
Pathway
biu04550  Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:biu00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04550 Signaling pathways regulating pluripotency of stem cells
    109565775 (OTX1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:biu03000]
    109565775 (OTX1)
Transcription factors [BR:biu03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain Paired-related
    109565775 (OTX1)
SSDB
Motif
Pfam: TF_Otx Homeodomain Homeobox_KN SatD
Other DBs
NCBI-GeneID: 109565775
NCBI-ProteinID: XP_019825246
UniProt: A0A6P5CH22
Position
11:63363641..63369934
AA seq 355 aa
MMSYLKQPPYGMNGLGLAGPAMDLLHPSVGYPATPRKQRRERTTFTRSQLDVLEALFAKT
RYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQSGSGTKSRPAKKKSSPVRESSG
SESSGQFTPPAVSSSASSSSSASSASANPAAAAAAGLGGNPAVAVPSSLSTPAASSIWSP
ASISPGSAPASVSMPEPLAAPSNASCMQRSVAAGAASAAASYPMSYGQGGSYGQGYPAPS
SSYFGGVDCSSYLAPMHSHHHPHQLSPMAPSSMASHHHHHPHAHHPLSQSSGHHHHHHHH
HHQGYGGSGLAFNSADCLDYKEPGAAAASSAWKLNFNSPDCLDYKDQASWRFQVL
NT seq 1068 nt   +upstreamnt  +downstreamnt
atgatgtcttacctcaaacaacccccatatggtatgaatgggctcggtctagccgggcca
gccatggacctcctacacccctccgtgggctatccggccaccccgcggaagcagmgacgc
gagcgcaccaccttcacgcgctctcaactggacgtgctcgaggcgctctttgccaagact
cgctacccagacatctttatgcgcgaggaggtggcgctcaagatcaacctgccagagtcc
agagttcaggtctggttcaagaaccgccgcgccaaatgccgccagcagcagcagagcggg
agtgggaccaagagccgcccagcaaagaaaaagtcgtccccggtgcgggagagctcgggc
tccgaaagcagcggccagttcacgccgcctgctgtgtccagttccgcctcgtcctccagc
tccgcatccagcgcctcagccaaccccgcggcggccgcggctgcaggcctgggcgggaac
ccggcggtggcggtcccgtcgtcgttgagtacgcctgctgcttcgtccatctggagtccg
gcctccatctcgcccggctcagcgccggcttcagtgtcgatgcccgagcctttggctgca
cccagcaacgcatcgtgtatgcagcgctcggtagccgcaggagccgcctcggccgcagcc
tcctatcccatgtcctacggccagggcggcagctatggccagggctaccccgcgccctcc
tcttcctactttggcggcgtggactgcagctcgtatttagcgcccatgcactcgcaccac
cacccgcaccagctcagccctatggcaccctcctccatggcgagccaccatcaccaccat
ccccacgcacaccacccgctgagccagtcctcaggccaccaccaccaccaccatcaccac
caccaccagggctacggcggctcggggctcgccttcaactctgccgactgcttggattat
aaggagcctggcgctgccgccgcatcctctgcttggaaactcaacttcaactcgcctgac
tgtctggactataaggaccaagcctcatggaggtttcaggtcttgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (4)   
   Pfam (4)   
All databases (21)   

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