KEGG   Bos indicus (zebu cattle): 109566088
Entry
109566088         CDS       T04792                                 
Symbol
PNPT1
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial isoform X1
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
biu  Bos indicus (zebu cattle)
Pathway
biu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:biu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    109566088 (PNPT1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:biu03019]
    109566088 (PNPT1)
   03016 Transfer RNA biogenesis [BR:biu03016]
    109566088 (PNPT1)
Enzymes [BR:biu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     109566088 (PNPT1)
Messenger RNA biogenesis [BR:biu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     109566088 (PNPT1)
Transfer RNA biogenesis [BR:biu03016]
 Prokaryotic type
  tRNA degradation factors
   109566088 (PNPT1)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C KH_1 PNPase S1 RST
Other DBs
NCBI-GeneID: 109566088
NCBI-ProteinID: XP_019825732
UniProt: A0A6P5CLG0
Position
11:complement(39878411..39918668)
AA seq 783 aa
MAACRHCCSCLRLRPLGDGRLRLPGRDRTLTQLQVRALWGGTGPRSVAVDLGSRKLEISS
GKLARFADGSAVVQSGDTAVMVTAVSKTKPSPSQFMPLVVDYRQKAAAAGRIPTNYLRRE
IGSSDKEILTSRVIDRSIRPLFPAGYFYDTQILCNLLAVDGVNEPDVLAINGASVALSLS
DIPWNGPIGAVRIGMIDGECVVNPTRKEMANSTLNLVVTGAPKSQIVMLEASAENILQQD
FCHAIKVGVKHTQQIIQGIQQLVKENGVTKRTPQKLFVPSPEIVKHAHKLAMEKLYTVFT
DYEHDKISRDEAINKIRLDTEEQLKEKFPEVDSCEIIESFNIATKDVFRSIILNEYKRCD
GRDLTSLRNINCEVDMFKILHGSSLFQRGQTQVLCTVTFDSLESNFKSDRIITAINGIKD
KNFMLHYEFPPYATNEIGKVTGINRRELGHGALAERALYPVIPKDFPFTIRVTSEVLESN
GSSSMAXACGGSLALMDAGVPISSAVAGVAIGLVTKNSPDKGEIEDYRLLTDILGIEDYH
GDMDFKIAGTSKGITALQADIKLPGIPIKIVMEAIQQASVAKKEILQIMNKTISKPRASR
KENGPVVETVQVPLSKRAKFVGPGGYHLKKLQAETGVTISQVDEETFSIFAPTPSAMHEA
RDFITDICRDDQEQQLEFGAVYTATITEIRDTGVMVKLYPNMTAVLLHNTQLDQRKIKHP
SALGLEVGQEIQVKYFGRDPADGRMRLSRKVLQSPATTVVKTLNDRSSIVMGESVSQSSS
NSP
NT seq 2352 nt   +upstreamnt  +downstreamnt
atggcggcctgcaggcattgctgctcgtgtctccggctgcggcctctgggtgatggtcgc
ctccgtctgccagggcgggataggacactcacccagttacaggtgcgagcactatggggt
ggcaccgggccgcgatctgtggccgtggacttaggcagcagaaagttagaaatatcctct
ggaaaactggccagatttgcagatggctctgctgtagtacagtcaggtgacactgcagtg
atggtcacagcagtcagtaaaacaaaaccttcaccttcccaattcatgcctttggtggtt
gactatagacagaaggctgctgcagcaggtaggattcccacaaactatctcagaagagag
attggatcttctgataaagaaattcttacaagtcgagtaatagatcgttcaattagacct
ctctttccagctggctacttttacgatacacagatcctttgtaatctgttagcagtagat
ggtgttaatgaacctgatgtcctagcgattaatggtgcttctgtagccctctcattatca
gatattccttggaatggacctattggggcagtacgaataggaatgattgatggagaatgt
gtagttaacccaacacgaaaagaaatggctaacagtactttaaatttagtggttactgga
gcacctaaaagtcagattgtcatgttggaagcctctgcagagaatattttacagcaggac
ttttgccatgctatcaaagtgggagtaaaacatacacaacaaataattcagggcatccag
cagttggtaaaagaaaatggtgttaccaagaggacacctcagaagttatttgtcccttcg
ccagagattgtcaaacacgctcataaactcgccatggaaaaactctacacagtttttaca
gattatgaacatgataaaatttccagagatgaagctattaacaaaattagattagataca
gaggaacaactaaaagaaaaatttccagaggttgattcctgtgaaataatagaatccttc
aatattgctacaaaggatgtttttagaagtattattttgaatgagtacaaaaggtgtgac
ggtcgagatttgacttcacttaggaatataaattgtgaggtagatatgtttaaaattctt
cacggatcatcattatttcagaggggacagacacaggtgctttgtactgttacatttgat
tcattagaatccaattttaagtcagaccgaattataacagctataaatggaataaaagat
aaaaatttcatgctgcactatgagtttcctccctatgcaactaatgaaattggcaaagtc
actggtataaatagaagagaacttgggcatggtgctcttgctgagagagctctgtatcct
gttattcctaaagattttccattcaccataagagtcacatcagaagtactagagtcaaat
gggtcatcttctatggcayctgcatgtggtggaagtttagcattaatggatgcaggagtt
ccaatttcatctgctgtggcaggtgtggcaataggattggtcaccaaaaacagtcctgac
aaaggtgaaatagaagactatcgtttgctgacagatattctggggattgaagattaccat
ggtgacatggatttcaaaatagctggaacttctaaaggaataactgcattgcaggctgac
atcaaattacctggaataccaataaaaattgtaatggaggccattcagcaagcctcagtg
gcaaaaaaggagatattacagataatgaacaaaactatttcaaaacctcgagcatctaga
aaagaaaatggacctgttgtagaaactgttcaggttccgttatcaaaacgagcaaaattt
gttggacccggtggatatcatttaaaaaaacttcaggctgaaacaggagtcactattagc
caggtagatgaagaaacgttttctatctttgcaccaacacctagcgccatgcatgaagca
agagacttcattactgatatctgcagagatgatcaagagcagcaattagaatttggagca
gtgtacactgccacaataactgaaatcagagacactggagtaatggttaaactctatcca
aatatgactgcagtactacttcacaacacacaacttgatcaacgaaagattaaacatccc
agtgctttaggattagaagttggccaagaaattcaggtgaaatactttggacgtgatcca
gctgatggaagaatgaggctttctcgtaaagtgcttcagtctccagctacaactgttgtc
aaaactttgaatgacagaagtagtattgtaatgggagaatctgtttcacagtcatcatct
aattctccttga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (6)   
   Pfam (6)   
All databases (25)   

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