KEGG   Bos indicus (zebu cattle): 109570159
Entry
109570159         CDS       T04792                                 
Symbol
CHD5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5
  KO
K14435  chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
biu  Bos indicus (zebu cattle)
Brite
KEGG Orthology (KO) [BR:biu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:biu03036]
    109570159 (CHD5)
Chromosome and associated proteins [BR:biu03036]
 Eukaryotic type
  Chromatin remodeling factors
   Other chromatin remodeling factors
    109570159 (CHD5)
SSDB
Motif
Pfam: SNF2-rel_dom CHDCT2 CHDII_SANT-like Helicase_C CHDNT PHD DUF1087 Chromo ResIII HDA2-3 DEAD PHD_2 HMG_box AAA_22
Other DBs
NCBI-GeneID: 109570159
NCBI-ProteinID: XP_019831508
UniProt: A0A6P5D0E4
Position
16:44363837..44429678
AA seq 2217 aa
MGTTNQSSILALPPAGCETENSLTFLELALSMSVFTWQDGEGLGLGCALPPAPVDRPLLC
KMRGMALGAFSSCVILLPFAPKRTLPFPTPMELRDHTLYPPDILEEEDGGLEGFDDFFPE
EPVSLPKKKKSKKLKENRSKGKRKKKEASVPRVCCIQLVVTWGPDERDRSGRRIRRPELF
VSSGAYKLPFLPPEGPESPPGPAPPLSYTLLFITVAPQLCPHLLLLASWAPGSTGGDELS
LAFLDTGYSRPLPEALVRKEAGYLSSHDVGGGDVTPLLLFISIQVAPTQDHGHQPPCPRL
CEQEGLDEIGVQIGVDQARTVPVTAHCSFTWDMPLSAVLKLLVAASSHPYLCWVGSNDEL
SENEEDLEEKSEKPLREEPPFPPVGVEADVSGGVSEPKSSGQLMAEWGLDDVDYLFSEAD
YHTLTNYKAFSQFLRPLIAKKNPKIPMSKMMTVLGAKWREFSANNPFKGSSAAAAAAAVA
AAVETVTIAPPLAISPQQAPQPVPIRKAKTKEGKGPGVRKKIKGSKDVKKKGKGRKVTGL
KFRFGGVGSKRKKGSSSEEDEREESDFDSASIHSSSMRSECSAALGKKSKRRRKKKRIDD
GDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQW
EPKDXDDDEDEGGCEEEEDDHMEFCRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGE
WLCPRCTCPPLKGKVQRILHWRWTEPPAPFMVGLPGPDVDPGVPPPKPLEGIXEREFFVK
WAGLSYWHCSWVKELQLELYHTVMYRNYQRKNDMDEPPPFDYGSGDEDGKSEKRKNKDPL
YAKMEERFYRYGIKPEWMMIHRILNHSFDKKGDVHYLIKWKDLPYDQCTWEIDEIDIPYY
DSLKQAYWGHRELMLGEDARLPKRLVKKGKKLKDDKQEKPPDTPIVDPTVKFDKQPWYID
STGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLV
SAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKE
VQIKFHVLLTSYEXITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLL
TGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKA
DVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCN
HPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLD
LLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADT
VIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVVR
PGLGSKSGSMTKQELDDILKFGTEELFKDDVEGMMSQGQRPATPIPDVQSSKGGALAASA
KKKHGSTPPGDNKDVEDSSVIHYDDAAISKLLDRNQDATDDTELQNMNEYLSSFKVAQYV
VREEDGVEEVEREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDA
SQEDQEWQDELSDNQSEYSIGSEDEDEDFEERPEGQSGRRQSRRQLKSDRDKPLPPLLAR
VGGNIEVLGFNARQRKAFLNAIMRWGMPPQDAFNSHWLVRDLRGKSEKEFRAYVSLFMRH
LCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQEFEHVNGKYSTPDLIPEGP
EGKKPGEVISSDPNTPVPASPAHLLPGPLGLPDKMEAPLGYMDEKEVGVQKPKKPPEIQA
LPTALDRVEGEDKQESSDGKERAREERLEEMEKAQPSPEQLLKEEVLPEKEKVLDKLELS
LIHSRGDSSDFRPDDTKAEEKEPVETQQNGDKEEDEEGKKEDKIGKFKFMFNIADGGFTE
LHTLWQNEERAAVSSGKIYDIWHRRHDYWLLAGIVTHGYARWQDIQNDPRYMILNEPFKS
EIHKGNYLEMKNKFLARRFKLLEQALVIEEQLRRAAYLNMTQDPNHPAMALNARLAEVEC
LAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTRLPSMLSRIPPVAARLQM
SERSILSRLTNRAGDPTIQQISSRPRDLALVQRSFPAEPRLPGPLPDPHRREKLPPF
NT seq 6654 nt   +upstreamnt  +downstreamnt
atggggaccaccaaccagagttctatcctggctctgccgcctgccggctgtgagactgag
aactccctcaccttcctggagttggctctctccatgtctgtgttcacctggcaggatggg
gaggggctgggactcgggtgtgccctgccgcctgctccagtggaccgacctctgctgtgc
aagatgcgggggatggctctgggtgctttttcttcctgtgtcatcttgctgccgtttgcc
cccaagaggaccctcccattccctacccccatggaactcagggatcataccctttatccc
cctgacatcctggaagaagaagatggtggccttgaaggcttcgatgactttttcccggag
gagcccgtgagcctccccaagaagaaaaagtccaagaagctcaaggagaacaggtccaaa
gggaagaggaagaagaaagaggcatctgtccctcgggtttgctgcatccagcttgttgtg
acttggggtcctgatgaacgtgatcgaagtgggagaagaataaggagacctgagctgttc
gtctcctcgggcgcatataaactgccctttctgcccccggaggggcctgagtctccgccg
ggcccagcgccacccctgtcctacactctgctcttcatcactgttgcacctcagctttgt
cctcacctcctgctcctggcatcctgggctcccggatcgacaggtggggatgagctttct
ctggccttcctggatacggggtacagcaggcccctccccgaggccctggtcaggaaggag
gcaggatatctgagttctcatgatgtgggtgggggggatgtcacccctttgctccttttc
atctccatccaggtggccccaacccaagaccatggccaccaacccccctgcccccggctg
tgtgagcaagagggcttggatgagattggggtgcagataggggtggaccaggcaagaact
gtgccggtcaccgctcactgctccttcacctgggatatgcctctgtccgcggtgctgaag
ctgctggtggctgcctcctcccatccttacctttgctgggttgggagcaatgacgagctg
tcggaaaatgaagaggatctggaagagaagtcggagaagcccctgcgtgaagagcctcct
ttcccaccagtgggtgtagaggcagatgtgtctgggggtgtgagtgagcccaagtcctcg
ggacagctcatggccgagtggggcctggacgacgtggactacctgttctccgaggccgac
taccacacgctgaccaactataaggccttcagccagttcctcagaccgctcatcgccaag
aagaacccgaagatccccatgtcaaagatgatgactgtcctgggtgccaaatggcgggag
ttcagtgccaacaaccccttcaagggcagctcggcggcagcagctgcagcggcagtggcc
gcggccgtggagacggtcaccatcgcgcctcccctggctatcagcccccagcaggcaccc
cagcctgtgcccatccgcaaggccaagaccaaagagggcaaggggcctggcgtgaggaag
aagatcaaaggctccaaggatgtgaagaaaaagggtaaagggagaaaggtgactgggctc
aagttccgcttcggaggggtcggcagcaagaggaagaaggggtcctcgagcgaggaggat
gagcgagaggagtcggacttcgacagcgccagcatccatagctcctccatgcgttccgag
tgctctgctgccctggggaagaagagcaagaggaggcgcaagaagaagagaatcgatgat
ggcgatggctatgagacggaccaccaggactactgtgaggtgtgccagcagggtggggag
atcattctgtgtgacacctgcccgagggcctaccacctcgtctgtctggatcccgagctg
gagaaagctcctgagggcaagtggagctgtccccactgtgagaaggaagggatccagtgg
gagccgaaggacgrcgacgacgacgaggacgagggcggctgcgaggaggaggaggacgac
cacatggagttctgccgcgtgtgcaaggacggcggcgagctgctctgctgcgacgcctgc
ccctcttcctaccacctgcactgcctcaacccgccgctgcccgagatcccaaacggtgaa
tggctctgcccgcgctgtacttgtcccccactgaagggcaaagtccagcggatcctgcac
tggcggtggacagagcccccagcccccttcatggtggggctgccggggcctgacgtggac
cctggtgtacccccgcccaagcccctggagggcatcycagagagagagttcttcgtcaag
tgggctgggctctcctactggcactgctcctgggtgaaggagctccagctggagctctac
cacacagtgatgtatcgcaactaccaaagaaagaacgacatggatgagccaccgcccttt
gactatggctctggcgacgaggacggcaagagcgagaagaggaagaacaaggaccctctc
tatgccaagatggaggagcgcttctaccgctacggcatcaagcccgagtggatgatgatc
caccgcatcctgaaccacagcttcgataaaaagggggacgtacattacctaatcaagtgg
aaagacctgccctacgaccagtgcacctgggagattgacgaaattgacatcccctactac
gacagcctgaagcaggcctactggggccacagggagctgatgctgggagaggatgccagg
ctgcccaagaggctggtcaagaagggcaagaagctgaaggatgacaaacaggagaagccc
ccggacacacccattgtggatcccacggtcaagtttgacaaacaaccatggtacattgac
tccacgggcggcacgctgcacccgtaccagctggagggccttaactggctgcgcttctcc
tgggcccagggcaccgacaccatcctggccgacgagatgggtctgggcaagactgtgcag
accatcgtcttcctctactccctgtacaaggaggggcactccaaagggccctacctggtc
agtgcgcccctatccaccatcatcaactgggaacgtgagttcgagatgtgggcccctgac
ttctacgtggtcacctacacgggggacaaggagagccgctccgtgatccgggagaacgag
ttttcctttgaggacaatgccattcggagtgggaagaaggtgttccggatgaagaaagaa
gtgcagatcaaattccacgtccttctcacctcctatgagcycatcaccatcgaccaggcc
atcctgggctccatcgagtgggcctgcctcgtggtggatgaggcccaccggctcaagaac
aaccagtccaagttctttagggtcttgaacagctacaagatcgattataagctgctgctg
acagggaccccccttcagaacaacctggaagaactgttccacctcctcaacttcctgact
ccagagaggttcaacaacctggagggcttcctggaggagtttgctgacatctccaaggaa
gaccagatcaagaagctgcacgacctgttggggccgcacatgctgaggcggctcaaggct
gatgtgttcaagaacatgccggcaaagactgagctgattgtccgcgtggagttgagccaa
atgcagaagaagtactacaagttcatcctcacgcggaacttcgaggcactgaactccaag
gggggtgggaaccaggtgtcactgcttaacatcatgatggacctgaagaagtgctgcaac
cacccctacctcttccctgtggctgctgtggaggcccccgtcctgcccaatggctcctat
gatggcagctctctggtcaagtcttcagggaagctcatgctgctacagaagatgctcaag
aaactgcgggatgaagggcaccgtgtgctcatcttctcccagatgaccaagatgctggac
ctcctggaggacttcctggagtatgagggctacaagtatgagcggattgacggtggcatc
acggggggccttcggcaagaagcaattgacagattcaatgcccctggggcccagcagttc
tgcttcctcctttcgacccgggcaggtggcctggggatcaacctggccacsgcagacacg
gtcatcatctacgactcggactggaacccgcacaatgacatccaggccttcagccgcgcc
caccgcattgggcagaacaagaaggtgatgatctaccgctttgtgacgcgggcctcagtg
gaggagcgcatcacrcaggtggccaagcgcaagatgatgctcacccacctggtggtgcga
cctggcctgggctccaagtctggctccatgaccaagcaggagctggatgacatcctcaaa
tttggcacrgaggagctcttcaaggatgacgtggagggcatgatgtctcagggccagaga
ccagccacgcccatccctgatgtccagtcctccaaagggggagccttggccgccagcgcc
aagaaaaagcatggcagcactccgccaggtgacaacaaggacgtggaggatagcagtgtg
atccactatgacgatgcggccatctccaagctgctggaccggaaccaggatgccacggac
gacacggagctccagaacatgaatgartatctgagctccttcaaggtggcgcagtacgtg
gtgcgcgaggaggatggcgtggaggargtggaacgggagatcatcaagcaggaggagaac
gtggaccccgactactgggagaagctgctgcggcaccactacgagcagcagcaggaggac
ctggcgcgcaacctgggcaagggcaagcgcatccgcaagcaggtcaactacaacgacgcc
tcccaggaggaccaggagtggcaggacgagctctcagacaaccaatctgaatattccatt
ggctctgaggatgaggacgaggactttgaggaaaggccggaagggcagagtggacggcga
caatccaggaggcagctgaagagcgacagggacaagcctctgccccctcttcttgcccga
gtcggyggcaacattgaggtgctaggcttcaatgcccgccagcggaaggcctttttgaac
gccatcatgcgctggggcatgcccccccaggatgccttcaactcccactggctggtgcgg
gaccttcgtgggaagagcgagaaggagtttagagcctatgtgtccctcttcatgcggcac
ctgtgtgagccgggggctgacggcgcrgagacctttgcggacggcgtgccccgtgagggc
ctctccaggcagcacgtgctcacgcgcatcggggtcatgtcactagttaggaagaaggtt
caggagtttgagcacgtcaacgggaagtacagcaccccrgatctgatccccgaggggccc
gagggcaagaagccrggcgaagtcatctcctcggatcccaacacaccagtgcccgccagc
cctgcccacctcctgcctggccctctgggcctgccagacaaaatggaagccccactaggc
tacatggatgagaaggaggtgggggtgcagaagccaaagaagcccccagaaatccaggcc
ytgccaactgccctggacagagtggagggagaggacaagcaggagagctcagatggcaag
gagagggcccgagaggagcgactggaggagatggagaaggcccagccctccccggagcag
ctgctgaaagaagaagtgcttcctgagaaggagaaggttctggacaagctggaactgagc
ttgattcacagcagaggcgacagcagtgacttcaggccagatgacaccaaagctgaggag
aaggagcctgttgagacccagcaaaatggtgacaaagaggaagatgaagaggggaagaaa
gaggacaagatcgggaaattcaagtttatgttcaacattgcagacgggggattcacagag
ctgcacacactgtggcagaacgaggagcgtgcggctgtgtcctcggggaaaatctacgac
atctggcaccggcgccacgactactggctgctggcgggcatcgtcacgcatggctatgcc
cgctggcaggacatccagaacgacccgagatacatgatcctcaatgagcccttcaagtct
gagatccacaagggcaactacttggagatgaagaacaagttcctggcccgcaggttcaag
ctgctggagcaggcgctggtcattgaggaacagctccggagggccgcatacctcaacatg
acccaggaccccaaccatcctgccatggccctcaacgcccgcctggccgaggtggagtgc
cttgcygagagccaccagcacctgtccaaggagtccctcgccgggaacaagcctgccaat
gctgtgctgcacaaggtcctgaaccagctggaggagctgctgagcgacatgaaggcggac
gtgacgcgcctcccctccatgctgtcccgcattcccccggtggccgcccgcctccagatg
tcggagcgcagcatcctgagccgcctgaccaaccgagccggcgaccccaccatccagcag
atatctagccggccccgagacctcgctctggtgcagcgctcctttccagcggagccacgc
ctgccgggccccctgcctgatccccacaggagagaaaagctgccgcctttctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (14)   
   Pfam (14)   
All databases (24)   

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