KEGG   Bos indicus (zebu cattle): 109571236
Entry
109571236         CDS       T04792                                 
Symbol
SMARCA5
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5
  KO
K11654  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
biu  Bos indicus (zebu cattle)
Pathway
biu03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:biu00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    109571236 (SMARCA5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:biu03021]
    109571236 (SMARCA5)
   03036 Chromosome and associated proteins [BR:biu03036]
    109571236 (SMARCA5)
Transcription machinery [BR:biu03021]
 Eukaryotic type
  RNA polymerase I system
   Other transcription-related factors
    NoRC (nucleolar remodeling complex)
     109571236 (SMARCA5)
Chromosome and associated proteins [BR:biu03036]
 Eukaryotic type
  Chromatin remodeling factors
   CHRAC complex
    109571236 (SMARCA5)
   RSF complex
    109571236 (SMARCA5)
   WICH complex
    109571236 (SMARCA5)
   B-WICH complex
    109571236 (SMARCA5)
   NORC complex
    109571236 (SMARCA5)
   BRF complex
    109571236 (SMARCA5)
   NuRF complex (fruit fly)
    109571236 (SMARCA5)
SSDB
Motif
Pfam: SNF2-rel_dom SLIDE HAND Helicase_C ResIII DEAD HDA2-3 Myb_DNA-binding DBINO AAA_14
Other DBs
NCBI-GeneID: 109571236
NCBI-ProteinID: XP_019833105
UniProt: A0A6P5D5M2
Position
17:complement(15320772..15359602)
AA seq 1052 aa
MSSAADPPPPPPPESAPSKPXXXXAGSGSNSSNKGGPEGVAAQGAPSVGNAGPTDSEMEE
VFDNASPGKQKEIQEPDPTYEEKMQTDRANRFEYLLKQTELFAHFIQPAAQKTPTSPLKM
KPGRPRIKKDEKQNLLSVGDYRHRRTEQEEDEELLTESSKATNVCTRFEDSPSYVKWGKL
RDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKST
LHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKF
NWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFN
SADDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQ
REWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVT
NSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQE
SINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTK
TVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEMLQMIRHGATH
VFASKESEITDEDIDGILERGAKKTAEMNEKLSKMGESSLRNFTMDTESSVYNFEGEDYR
EKQKIAFTEWIEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPR
LFELLEKEILYYRKTIGYKVPRNPDLPNAAQAQKEEQLKIDEAEPLNDEELEEKEKLLTQ
GFTNWNKRDFNQFIKANEKWGRDDIENIAREVEGKTPEEVIEYSAVFWERCNELQDIEKI
MAQIERGEARIQRRISIKKALDTKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLH
KLGFDKENVYDELRQCIRNSPQFRFDWFLKSRTAMELQRRCNTLITLIERENMELEEKEK
AEKKKRGPKPSTQKRKMDGAPDGRGRKKKLKL
NT seq 3159 nt   +upstreamnt  +downstreamnt
atgtcgtccgcggccgaccctccgccacccccgcctcccgagagcgcgccttcgaagccn
nnnnnnnnnnnngccggcagcgggagcaacagcagcaacaaaggcggccccgagggcgtc
gcagcccagggggctccctccgtgggcaacgccggccccacggactcggagatggaggaa
gtatttgacaatgcatctcctggaaagcaaaaagaaatccaagaaccagatcccacctat
gaagaaaaaatgcaaactgaccgggcaaatagatttgaatatttattaaagcagacagaa
ctgtttgcacatttcattcagcctgctgctcagaagactccaacctcacctttgaagatg
aaaccagggcgcccacgaataaaaaaggatgagaaacagaacttgctctcagttggcgac
tatcgacaccgaagaacagagcaagaagaagatgaagaattattaacagaaagctccaaa
gcaaccaatgtttgcactcggtttgaagactctccatcgtatgtaaaatggggtaaactg
agagattatcaagtccgaggattaaattggctcatttctttgtatgagaacggcatcaat
ggtatccttgcagatgaaatgggcctgggaaagacacttcaaacaatttctcttcttggg
tacatgaaacactatagaaacattcctggtcctcatatggttttggtgcctaagtctaca
ttacacaactggatgagtgaattcaagagatgggtaccaacacttagatctgtttgttta
ataggggataaagaacaaagggctgcttttgtcagagatgttttgttaccaggagaatgg
gatgtatgtgtaacttcttatgaaatgcttattaaagagaagtctgtttttaaaaaattt
aactggaggtacttagttattgatgaagctcacaggatcaaaaatgaaaaatccaagttg
tcagaaatagtgagggaattcaagactacaaatcgactattattaactggaacacctctt
caaaacaacttgcatgaactttggtcacttcttaattttttgttaccagatgtctttaat
tcagctgatgactttgattcctggtttgatacaaataattgccttggggatcaaaagtta
gttgagagacttcatatggttttgcgtccattcctcctccgtcgaattaaggctgatgtt
gaaaagagtttacctccaaagaaggaagtaaaaatctatgtgggtctcagcaaaatgcaa
agggaatggtatactcggatattgatgaaggatatagatatactgaactctgcagggaag
atggacaaaatgcggctattgaacattctgatgcagttgaggaagtgctgtaaccacccc
tatctctttgatggggctgaaccgggtcctccttacacaacggacatgcatctggttacc
aacagtggcaaaatggtggtgttagacaagctgctccctaaattaaaagaacaaggttcg
cgagtactgatcttcagtcagatgaccagggtattggatattttggaagattattgcatg
tggaggaattatgagtactgtaggttggatggacagacaccccatgatgagagacaagag
tccatcaatgcgtacaatgaaccaaacagcacaaaatttgtttttatgttaagcacacga
gctggtggtcttggcatcaatcttgctactgctgatgttgtgattttgtatgactcagat
tggaatccccaagtagatcttcaggctatggaccgagcacatagaattggacagaccaag
acagtcagagtgtttcgcttcataaccgataacactgtagaagaaagaatagtggagcgt
gctgagatgaaactcagactggattcaatcgtcatccagcaggggagacttgtggatcag
aatctgaacaaaattgggaaagatgaaatgcttcaaatgataaggcatggggcaacacac
gtgtttgcctcaaaggagagtgagattactgatgaggatattgatgggattttggaaaga
ggtgcaaagaagactgcagagatgaatgaaaagctctccaagatgggtgaaagctcactt
agaaatttcacaatggatacagagtcgagtgtttataactttgaaggagaagattataga
gaaaaacaaaagattgcattcacagagtggattgagcctcctaaacgagaaagaaaagcc
aactatgctgtcgatgcctatttcagggaagctcttcgagtcagtgaacctaaagcaccc
aaggctcctcgacctccaaagcaacccaatgttcaggatttccagttctttcctccacgt
ctatttgaattattggaaaaagaaattctatattacagaaaaacaattggttacaaggtc
cctcgaaatcctgacctaccaaatgcagcacaggcacaaaaggaagaacagctgaaaatt
gatgaagccgagccccttaatgatgaagagttagaggagaaagagaagcttctgacgcag
ggatttaccaattggaataagagagattttaaccagtttatcaaagctaatgagaagtgg
ggtcgtgatgatattgaaaatatagcaagagaagtagaaggaaaaactccagaagaagtc
attgaatactcagctgtgttctgggaaagatgcaatgagctgcaggacatagaaaagatt
atggctcagattgaaagaggagaggcaagaattcagagaagaattagtatcaaaaaagca
cttgacacgaagattggacggtacaaagcaccttttcatcagctgagaatatcttatggt
actaacaaagggaaaaactacactgaggaggaagaccgcttcctgatctgtatgcttcac
aagcttggattcgacaaggaaaacgtgtatgatgagctgcggcagtgcattcgcaactct
cctcagttcagattcgactggtttctaaagtccagaactgcaatggaactccagaggagg
tgtaacaccttaattaccttgattgaaagagaaaatatggaactagaagaaaaggagaag
gcagagaagaagaaaagaggacccaagccttcaacacagaaacgtaaaatggacggagca
cctgatggccgaggaagaaaaaagaagctgaaactatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (10)   
   Pfam (10)   
All databases (24)   

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