KEGG   Bos indicus (zebu cattle): 109576090
Entry
109576090         CDS       T04792                                 
Name
(RefSeq) protein VPRBP
  KO
K11789  DDB1- and CUL4-associated factor 1 [EC:2.7.11.1]
Organism
biu  Bos indicus (zebu cattle)
Pathway
biu05170  Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:biu00001]
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    109576090
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:biu01001]
    109576090
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:biu04121]
    109576090
Enzymes [BR:biu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.1  non-specific serine/threonine protein kinase
     109576090
Protein kinases [BR:biu01001]
 Serine/threonine kinases: Other
  Other
   109576090
Ubiquitin system [BR:biu04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     109576090
SSDB
Motif
Pfam: ANAPC4_WD40
Other DBs
NCBI-GeneID: 109576090
NCBI-ProteinID: XP_019839998
UniProt: A0A6P5DNP7
Position
22:50317734..50441963
AA seq 1507 aa
MTTVAVHVDSKAELTTLLEQWEKEHGSGQDMVPILTRMSELIEKETEEYRKGDPDPFDDR
HPGRADPECMLGHLLRILFKNDDFMNALVNAYVMTSREPPLNTAACRLLLDIMPGLETAV
VFQEKEGIVENLFKWXXEAEKPLRTYSTGLLGGAMENQDIAANYRDENSQLVAIVLRRLR
ELQLQEVGSRQESKRPSPRKLSSEPLLPLDEEAVDMDYGDMAVDVVDGEQEEASGDMEIS
FHLESGHKTSSRVNSATKLEEGALRKNKSTKQADRESFRKAKQKLGFSSSDPDRMFVELS
NSSWSEMSPWVIGTNYTLYPMTPAIEQRLILQYLTPLGEYQELLPIFMQLGSRELMMFYI
DLKQTNDVLLTFEALKHLASLLLHNKFATEFVAHGGVQKLLEIPRPSMAATGVSMCLYYL
SYNQDAMERVCMHPHNVLSDVVNYTLWLMECSHASGCCHATMFFSICFSFRAVLELFDRY
DGLRRLVNLISTLEILNLEDQGALLSDDEIFASRQTGKHTCMALRKYFEAHLAIKLEQVK
QSLQRTEGGILVHPQPPYKACSYTHEQIVEMMEFLIEYGPAQLYWEPAEVFLKLSCVQLL
LQLISIACNWKTYYARNDTVRFALDVLAILTVVPKIQLQLAESVDVLDEAGSTVSTVGIS
IILGVAEGEFFIHDAEIQKSALQIIINCVCGPDNRISSIGKFISGTPRRKLPQTPKSSEH
TLAKMWNVVQSNNGIKVLLSLLSVKMPITDADQIRALACKALVGLSRSSTMRQIISKLPL
FSSCQIQQLMKEPVLQDKRSDHVKFCKYAAELIERVSGKPLLIGTDVSLARLQKADVVAQ
SRISFPEKELLLLIRNHLISKGLGETATVLTKEADLPMTAASHSSAFTPVTAAASPVSLP
RTPRIANGIATRLGSHAAVGTSAPSAPAAHPQPRVPQGSLALPGPSHAGNSPVIGRISFI
RERPSPCNGRKIRVLRQKSDHGAYSQSPAIKKQLDRHLPSPPTLDSIITEYLREQHARCK
NPVATCPPFSLFTPHQCPEPKQRRQAPINFTSRLNRRASFPKYGGVDGGCFDRHLIFSRF
RPISVFREANEDESGLTCCAFSARERFLMLGTCTGQLKLYNVFSGQEEASYNCHNSAITH
LEPSRDGSLLLTSATWSQPLSALWGMKSVFDMKHSFTEDHYVEFSKHSQDRVIGTKGDIA
HIYDIQTGNKLLTLFNPDLANNYKRNCATFNPTDDLVLNDGVLWDVRSAQAIHKFDKFNM
NISGVFHPNGLEVIINTEIWDLRTFHLLHTVPALDQCRVVFNHTGTVMYGAMLQADDEDD
LLEERMKSPFGSSFRTFNATDYKPIATIDVKRNIFDLCTDTKDCYLAVIENQGSMDALNM
DTVCRLYEVGRQRLAEDEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEED
DNNENAGEDGDNDFSPSDEELANLLEEGEDAEDEDSDADEEVELILGDTDSSDNSDLEDD
IILSLNE
NT seq 4524 nt   +upstreamnt  +downstreamnt
atgactacagtagcggtccatgtggactccaaagctgagctcactaccctgttggagcag
tgggaaaaggaacatggcagtgggcaggacatggtacccatccttaccaggatgtctgaa
ttgattgaaaaagaaactgaagaatatcgtaagggggatccagacccatttgatgatcgg
catcctggtcgagctgatccagagtgtatgctgggccatttgctgagaatactcttcaag
aatgatgatttcatgaatgcactggtgaatgcatatgtgatgacaagccgagagccccct
ttaaacactgcagcttgcagactcctactggacatcatgcccgggctggaaactgctgtt
gtctttcaagaaaaggaaggaattgttgagaaccttttcaaatgggnnnnagaggctgaa
aagccactgaggacatattctactggtctgttaggtggtgctatggagaatcaagacatc
gctgctaactacagggatgagaactcacagctggtggcaatagtgcttcgaagattgagg
gagctgcagcttcaggaagtaggttcaaggcaagaaagcaagcgtcctagcccacgaaag
ctctcctctgaaccccttttgcctctggatgaagaagctgtggatatggactatggcgac
atggctgtagatgtagtagatggcgaacaagaggaagcttctggagacatggagatctcc
tttcatcttgagtcaggccacaagaccagtagcagagtgaactcagcaacgaaacttgaa
gaaggggcattgaggaaaaacaagtcaacaaaacaggctgacagagagagcttcaggaaa
gccaagcaaaagttgggtttttcatcatctgatccagaccgcatgtttgttgaattgtct
aatagcagctggtcagaaatgtccccctgggtgattggcaccaattataccctttatcct
atgactcctgctattgagcagcgacttattctccagtatttgacccctttaggagaatat
caggagttacttcccatattcatgcagcttggatcacgggagttgatgatgttctacatt
gacttaaaacaaactaatgatgtcctgcttacatttgaggcgctcaagcacctagcatct
ctcctgctccacaataagtttgccacagaatttgttgcgcacggtggagtacagaaatta
ctggaaattcctcgtccttctatggctgcaactggtgtatccatgtgcttgtattacctg
tcctacaaccaggatgccatggaaagagtttgcatgcatccccacaatgttctgtctgat
gtggtgaactacaccctgtggctaatggaatgttcacatgcctcaggatgctgccatgct
accatgtttttctcaatctgcttctccttccgggctgtgttggaactctttgaccgctac
gatggtcttcgtcgtctggtgaacttgatcagtactttggagattctaaatttggaagat
cagggtgcacttctgagtgatgatgaaatattcgctagccggcagactggtaaacacacc
tgcatggccttgcgcaagtactttgaagctcacctggccattaaattggaacaagtgaag
cagtctcttcagaggactgaaggtggcattcttgttcatcctcaacctccctacaaggca
tgttcatatactcatgaacagattgtggaaatgatggagtttctgatagaatatggccca
gcgcagctgtattgggagccagctgaagtcttcctcaagctgtcttgtgtccagctctta
ttgcaacttatttctattgcttgcaattggaagacctattatgcaaggaatgacactgtg
cgctttgctctggatgtcctggctattctcactgttgtgccaaaaattcagctccagttg
gcagaatcagtggatgtactagatgaggctggctccaccgtctccactgtaggtatcagc
attattttgggagtggctgagggtgagttctttattcacgatgctgaaattcagaagtca
gcacttcagattatcatcaattgtgtttgtggcccggataacagaatttctagtattggc
aagtttatctctggaacgcctcggaggaagctgcctcagacgcccaaaagcagtgagcac
actctggccaagatgtggaacgtggtgcagtccaacaacggcatcaaggtgcttctgtcc
ttactgtctgtcaagatgcccatcacagatgcagaccagatccgggccctagcctgcaag
gccctggtgggcctgtctcgcagtagcaccatgcggcagatcatcagcaaactgcccctt
ttcagcagctgccagatccagcagctgatgaaagagcctgtgcttcaggacaagcgtagt
gaccacgtcaagttctgcaagtacgccgctgagctcatcgaacgggtgtcgggaaagccg
cttcttatcggcaccgatgtgtccctggcacgtctgcagaaagctgacgttgttgcccag
tcacggatctcctttcctgagaaagagctgcttctactgatccgaaaccatctcatttct
aaaggccttggggagacagccactgtgctgactaaagaggccgacctgcccatgactgct
gcctcccattcttcggccttcaccccggtcactgctgctgcttctcctgtttctcttccc
cgcacccctcgcatcgccaatggcattgcaactcgattgggtagccatgctgctgtgggt
acctctgccccttctgcccccgctgctcatcctcagccgcgggtgccccagggttcacta
gctctgcctggtccatctcatgcaggaaactcccctgtgattggtaggatcagttttatc
agagagaggccatcaccctgcaatggcaggaaaatcagagtgttgcggcagaagtcggac
catggcgcctacagccagagcccagccataaaaaagcagctggacagacaccttccctcc
ccgcctacgctggacagtatcatcacagaatatcttagagagcagcatgctcgctgcaag
aacccagttgccacctgcccacccttctctctctttactcctcaccagtgtcctgagcca
aaacagaggcgacaagcgccaataaactttacctcaaggctaaaccgcagggcatcattt
ccaaagtatggaggggtagatggcgggtgctttgataggcaccttatctttagcaggttc
cgtcctatttcagtgttccgggaagccaacgaggatgagagtggcctcacctgctgtgcg
ttctccgcacgagagcgcttcctgatgctgggcacctgcaccgggcagttgaagctctac
aacgtgttcagtggacaggaggaggccagctacaactgtcacaactcagccatcacacac
ctggagccctccagggatggatccttgctgctgacatcagctacctggagccagcctctg
tctgcactgtggggaatgaaatcagtatttgatatgaagcattcctttacagaagatcat
tatgttgagttcagtaagcattctcaggaccgggtcataggcacgaagggagacatcgcc
catatttatgatattcagactggcaacaagctgttgactctgtttaacccagatcttgcc
aacaactacaagaggaactgcgccacctttaatcctacagacgatcttgtcttaaatgat
ggcgtcctgtgggatgtccgctctgcacaggccatccacaagttcgacaagttcaacatg
aacatcagtggcgtcttccatccgaacgggctggaggtcatcattaatactgagatttgg
gaccttcgaaccttccatcttttacacacagttcctgctctcgatcagtgtcgcgtggtg
ttcaaccacacggggacagtgatgtatggagctatgttgcaggcagatgatgaagatgac
ctattggaagagaggatgaaaagcccttttggatcatccttccgaacatttaatgcgact
gactacaaacctatagcaacaattgacgtgaaaaggaacatttttgacctgtgtacagac
accaaagactgctatcttgctgtcatcgagaaccaaggcagtatggacgcgctgaacatg
gacaccgtgtgcaggctgtatgaagtgggcaggcagcgtctggcggaggacgaggacgag
gaggaggaccaggaagaggaagagcaggaggaagaagacgacgacgaagacgacgacgac
actgatgatctggacgagctggacactgaccagctgctggaggcagagctcgaggaggac
gacaacaacgagaacgcgggggaggatggggacaatgacttctcgccctctgacgaggag
ctggcgaacctcctggaggagggggaggacgcggaggacgaagactcagatgcagacgag
gaagtggaactgatcctgggggacaccgacagctctgacaactctgatttggaagatgac
atcatcttatctctaaatgagtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (1)   
   Pfam (1)   
All databases (17)   

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