KEGG   Bos indicus (zebu cattle): 109577835
Entry
109577835         CDS       T04792                                 
Symbol
NPC1
Name
(RefSeq) Niemann-Pick C1 protein
  KO
K12385  Niemann-Pick C1 protein
Organism
biu  Bos indicus (zebu cattle)
Pathway
biu03265  Virion - Ebolavirus and Lyssavirus
biu04142  Lysosome
biu04979  Cholesterol metabolism
Brite
KEGG Orthology (KO) [BR:biu00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03265 Virion - Ebolavirus and Lyssavirus
    109577835 (NPC1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome
    109577835 (NPC1)
 09150 Organismal Systems
  09154 Digestive system
   04979 Cholesterol metabolism
    109577835 (NPC1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:biu02000]
    109577835 (NPC1)
Transporters [BR:biu02000]
 Solute carrier family (SLC)
  SLC65: NPC-type cholesterol transporter
   109577835 (NPC1)
SSDB
Motif
Pfam: Patched NPC1_N Sterol-sensing MMPL ACR_tran TMEM51
Other DBs
NCBI-GeneID: 109577835
NCBI-ProteinID: XP_019842271
UniProt: A0A6P5DVF2
Position
24:34148748..34195817
AA seq 1277 aa
MSVRGPAFGLLLLLFCPAQVFSQSCIWYGECGIASGDKRYNCRYSGPPKPLPQDGYDLVQ
ELCPGFFFGNVSLCCDVQQLHTLKDNLQLPLQFLSRCPSCFYNLVNLFCELTCSPRQSQF
LNVTATEDYVDPATNQTKTNVKELQYYVGESFANAMYNSCRDVEAPSSNEKALGLLCGRE
ASACNATNWIEYMFNKDNGQAPFTITPVFSDLPTHGMEPMNNATKGCDESVDEVTGPCSC
QDCSAVCGPKPQPPPPPVPWRILGLDAMYVIMWSTYMAFLLVFFGAFFAVWCYRKRYFVS
EFTPIDGNIPFSINASDKGGPTCCDPLGAAFEAHLRRLFEWWGSFCVRHPGCVVFFSVAF
IAACSSGLVFIQVTTDPVDLWSAPGSQARLEKEYFDTHFGPFFRTEQLIIRAPHTPPHIY
EPYPSGADVPFGPPLAVDILHQVLDLQTAIESITASYNNETVTLRDICVAPLSPYNQNCT
ILSVLNYFQNSHSVLDHQVGDDFFVYADYHTHFLYCVRAPASLNDTSLLHDPCLGTFGGP
VFPWLVLGGYDDQNYNNATALVITFPVNNYYNDTEKLQRAQAWEREFINFVQNYENPNLT
ISFKAERSIEDELNRESNSDVFTVLISYGVMFLYISIALGHIKSCRRLLVDSKISLGIAG
VLIVLSSVACSLGIFSYIGVPLTLIVIEVIPFLVLAVGVDNIFILVQTYQRDERLQGETL
DQQVGRVLGEVAPSMFLSSFAETVAFFLGGLSVMPAVHTFSLFAGMAVLIDFLLQITCFV
SLLGLDIKRQEKNQLDVLCCVGGAADDAGIQASEXCLFRFFRNSYAPLLLKDWMRPLVVA
VFVGVLSFSIAVLNKVEIGLDQSLSMPDDSYVTDYFQSLNQYLHAGPPVYFVLEEGHDYT
STKGQNMVCGGLGCNNDSLVQQVFTAAQLDSYTRIGFAPSSWIDDYFDWVKPQSSCCRIY
NSTEQFCNASVVNPTCVRCRPLTPEGKQRPQGADFMRFLPMFLSDNPNPKCGKGGHAAYS
AAVNILDNGTRVGATYFMTYHTVLQTSADFIDAMEKARLIASNITRTMNQQGGDHRVFPY
SVFYVFYEQYLTMIDDTIFNLSVSLGAIFLVAVVLLGCELWSAVIMCATIAMILVNMFGV
MWLWGISLNAVSLVNLVMSCGISVEFCSHITRAFTVSTKGSRVERAEEALSHMGSSVFSG
ITLTKFGGIIVLAFAKSQIFQIFYFRMYLAMVLLGATHGLIFLPVLLSYIGPSINKAKSL
TTQQRYRGTEREQLLNF
NT seq 3834 nt   +upstreamnt  +downstreamnt
atgagcgtgcgcggcccagccttcggcctcctcctgctgctgttctgcccggcgcaggta
ttttcacagtcctgcatttggtatggagagtgtggaattgcatctggagataagagatac
aactgcagatattctgggccaccaaagccattgccacaggatggctatgacctagtgcag
gaactctgtccagggttcttctttggcaatgtcagtctttgctgtgatgtccagcagctt
cacacactgaaggacaacctgcagctgcctctgcagtttctgtccagatgtccatcctgt
ttttataacctagtgaacctgttttgtgagctgacatgtagccctcgacaaagtcagttt
ctgaacgttacagcaactgaagattatgttgatcctgctacaaaccagacgaaaacaaat
gtaaaagaattacagtactatgttggagagagttttgccaatgccatgtacaattcctgc
cgggatgtggaggccccctcgagcaacgagaaggccctggggctgctgtgcgggcgtgag
gccagcgcctgcaatgctactaactggatcgagtacatgttcaacaaggacaatggccag
gcgcccttcaccatcacccccgtcttttcagatcttccgacgcatgggatggagcccatg
aacaatgccaccaagggctgtgacgagtcggtggacgaggtcacggggccgtgcagctgc
caggactgctcggccgtctgcggccccaagccccagcccccaccccctcccgttccctgg
agaatcctgggtctggacgccatgtatgtcatcatgtggagcacctacatggctttcctg
ctcgtgttctttggagcgttctttgctgtgtggtgctacagaaaacggtattttgtctct
gagtttacccccattgatggcaatatacctttctctataaacgccagtgacaaagggggg
ccaacctgctgtgaccctctgggtgccgccttcgaggctcatctgcggcggctcttcgaa
tggtggggctccttctgcgtgaggcaccccggctgtgtcgtgttcttctccgtggccttc
atcgccgcctgttcctcaggcctggtgttcatccaggtcacaaccgacccggtggacctc
tggtcggcccccggcagccaggcgcgcctagagaaggagtactttgacacgcacttcggg
cccttcttccgcaccgagcagctcatcatcagggccccccacaccccgccgcacatatac
gagccctacccctcgggagccgacgtgccctttgggcctccccttgctgtagacattctg
caccaggtccttgacttacaaaccgccatcgagagcatcactgcttcttacaacaacgag
actgtgaccctgcgggacatctgcgtggcgcccctctcgccatacaaccagaactgcacc
atcctgagtgtgctgaactacttccagaacagccactctgtgctggaccatcaagtcggg
gatgacttcttcgtgtatgcagattaccacacgcacttcctctactgtgtccgggctcct
gcttccctgaatgacaccagtttgctccacgatccttgcctggggacgtttggtggccca
gtgttcccatggcttgtgcttggaggctacgatgatcaaaactacaataacgccacagcc
cttgtgatcacctttcctgtcaataattactataacgatacagagaagctccagagggcc
caggcctgggaaagagagttcattaattttgtgcaaaactacgagaatccaaatctgacc
atttcttttaaggctgaacgaagcattgaagatgaactaaaccgtgaaagtaacagtgat
gtgttcactgttctgatcagctatggcgtcatgtttttatatatttccatagccttgggg
catatcaaaagctgtcgcaggcttctggtggattcgaaaatctccctgggcattgccggt
gtcctgattgtgttgagctcagtggcctgctccttgggcatcttcagctacatcggggtc
cccctcaccctcattgtgatagaagtcatcccattcctcgtgctggctgtgggggtggac
aacatcttcatcctggtccagacctaccagagagatgaacgtcttcaaggggaaaccctc
gaccaacaggtgggccgggtcctgggagaagtggctcccagcatgttcctctcatccttc
gcagagacggtagcgtttttcttaggaggcctgtctgtgatgccggccgtgcacacgttc
tctctcttcgcgggcatggcagtcctcattgacttcctcctgcagatcacctgcttcgtg
agcctcctgggtttggacattaagcggcaagagaagaaccagctggacgttctctgctgt
gtcgggggggcggcagacgacgcgggcatccaggcctccgagarctgcttgttccgcttc
ttcagaaactcctacgcgccgcttctgctcaaggactggatgcggcccctcgtggtggca
gtatttgtgggtgtgctgtcgttcagtatcgcagtcctgaacaaagtagagatcggattg
gatcagtctctttcaatgccggatgactcctacgtgacggattacttccagtccctgaat
cagtacctgcacgcaggcccacctgtgtacttcgtgctggaggagggccacgactacacg
tccacgaaggggcagaacatggtgtgcgggggcctcggctgcaacaacgactcgctggtg
cagcaggtcttcacggccgcccagctggacagctacacccggataggctttgccccgtcg
tcctggattgacgattactttgactgggtcaagcctcaatcttcttgctgtcgcatctac
aacagcacggagcagttctgcaatgcatcggtggtcaaccctacctgtgtccgctgccgg
ccgctgactccagagggcaagcagagacctcagggcgcagacttcatgaggttcctgccc
atgttcctctccgacaacccgaaccccaagtgtggcaaagggggacacgctgcctacagc
gcagccgtcaacatcctggacaacggcacgagggtgggagccacgtacttcatgacctac
cacacggtgctgcagacctcggctgacttcatcgatgccatggagaaggcccgcctcatc
gccagcaacatcaccaggaccatgaaccagcaggggggtgatcaccgggtgttcccatac
agcgtgttctatgtcttctatgagcagtacctgaccatgattgacgacaccatcttcaac
ctcagcgtgtccctgggcgccatcttcctggtggccgtggtcctcttgggctgtgagctg
tggtctgcggtcatcatgtgcgccaccatcgccatgatcttggtcaacatgtttggtgtc
atgtggctgtggggcatcagcctgaacgcggtttctctggtcaacctggtcatgagctgt
ggcatctccgtggagttctgtagccacatcacgagggccttcacggtgagcacgaagggc
agccgcgtagagcgggcggaggaggcgctctcccacatgggcagctctgtattcagtgga
atcacactaacgaaatttggaggcattatcgtgttggcttttgccaaatctcaaattttc
cagatattttacttcaggatgtatttagctatggtcttactgggagccactcatggacta
atattcctccctgtcctactcagttacataggcccgtcaataaataaagccaaaagtttg
accacgcagcagcgatacagaggtacagaacgagaacagctcctcaacttctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (19)   

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