KEGG   Bradyrhizobium diazoefficiens USDA 110: bll0477
Entry
bll0477           CDS       T00109                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
bja  Bradyrhizobium diazoefficiens USDA 110
Pathway
bja00300  Lysine biosynthesis
bja00470  D-Amino acid metabolism
bja01100  Metabolic pathways
bja01110  Biosynthesis of secondary metabolites
bja01120  Microbial metabolism in diverse environments
bja01230  Biosynthesis of amino acids
Module
bja_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:bja00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    bll0477 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    bll0477 (dapF)
Enzymes [BR:bja01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     bll0477 (dapF)
SSDB
Motif
Pfam: DAP_epimerase Response_reg DUF2924
Other DBs
NCBI-ProteinID: BAC45742
UniProt: Q89X45
Position
complement(517098..517973)
AA seq 291 aa
MSALANHAFAKMNGIGNEIVVVDMRDSTAKVTPDDARAVASAQGGVPYDQLMVLQKPRLD
GTEAFISIYNNDGSEAGACGNGMRCVVRRIFEKTGQATATFETAAGLLNAWQGPAPDLYT
VDMGVPKFGWQDIPLAEEFRDTRYIELQIGPIDNPILHSPSVVSMGNPHAIFWVDDVNAY
DLARFGPLLENHPIFPERANITLAHIVDRDHITIRTWERGAGLTRACGSAACATAVAAAR
LKRAERNVEITLPGGKLGIEWRERDDHVLMTGTATFEYEGNFDPALFAPAG
NT seq 876 nt   +upstreamnt  +downstreamnt
atgagcgcgctggccaaccacgcatttgccaagatgaacggtatcggcaacgagatcgtc
gttgtcgacatgcgcgattccacggcaaaggtgacgccggacgatgcccgcgcggtggca
tccgcgcagggcggcgtgccctacgatcagctcatggtgcttcagaagccgcggctcgac
ggcaccgaggccttcatcagcatctacaacaatgacggctccgaagccggcgcctgcggc
aacggcatgcgctgcgtggtgcggcgcatcttcgagaagaccgggcaggccacggcgacg
ttcgagacggccgccggcctgctcaatgcctggcagggcccggcgcccgatctctatacc
gtcgacatgggcgtgcccaagttcggctggcaggacattccgctggcggaagagtttcgc
gacacccgctacatcgaattgcagatcgggccgatcgacaatccgatcctgcattcgccc
tcagtggtgagcatgggcaacccgcacgcgatcttctgggtcgacgacgtcaacgcctat
gacctcgcgcgctttggcccgctgctggaaaaccatccgatcttccccgagcgcgccaac
atcacgctcgcccatatcgtcgaccgcgaccacatcacgatccgcacctgggagcgcggc
gccggtctcaccagggcctgcggttcggcggcttgcgcgacggccgtcgccgcggcgcgc
ctgaagcgcgccgagcgcaacgtcgagatcacgctgcccggcggcaagctcggcatcgaa
tggcgcgagcgcgacgaccacgtgctgatgacgggcaccgcgaccttcgaatatgagggc
aatttcgatccggcgctgttcgcgccggccggataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (9)   
   KEGG PATHWAY (6)   
   KEGG MODULE (3)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (3)   
   Pfam (3)   
All databases (36)   

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