KEGG   Bradyrhizobium diazoefficiens USDA 110: blr2037
Entry
blr2037           CDS       T00109                                 
Symbol
nifA
Name
(GenBank) nif-specific regulatory protein
  KO
K02584  Nif-specific regulatory protein
Organism
bja  Bradyrhizobium diazoefficiens USDA 110
Pathway
bja02020  Two-component system
Brite
KEGG Orthology (KO) [BR:bja00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    blr2037 (nifA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:bja03000]
    blr2037 (nifA)
Transcription factors [BR:bja03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    blr2037 (nifA)
SSDB
Motif
Pfam: Sigma54_activat Sigma54_activ_2 GAF HTH_8 AAA_5 AAA GAF_2 Mg_chelatase AAA_3 AAA_2 MCM bpMoxR AAA_16 HTH_28 TIP49 HTH_23 CbiX
Other DBs
NCBI-ProteinID: BAC47302
UniProt: P05407
Position
2196192..2198009
AA seq 605 aa
MQNEPRQSGHGSREDDQGNGDRLMLHIPSSSERPASQPEPERAPPGEPSHESALAGIYEI
SKILNAPGRLEVTLANVLGLLQSFVQMRHGLVSLFNDDGVPELTVGAGWSEGTDERYRTC
VPQKAIHEIVATGRSLMVENVAAETAFSAADREVLGASDSIPVAFIGVPIRVDSTVVGTL
TIDRIPEGSSSLLEYDARLLAMVANVIGQTIKLHRLFAGDREQSLVDKDRLEKQTVDRGP
PARERKQLQAHGIIGDSPALSALLEKIVVVARSNSTVLLRGESGTGKELVAKAIHESSVR
AKRPFVKLNCAALPETVLESELFGHEKGAFTGAVSARKGRFELADKGTLFLDEIGEISPP
FQAKLLRVLQEQEFERVGSNHTIKVDVRVIAATNRNLEEAVARSEFRADLYYRISVVPLL
LPPLRERRSDIPLLAREFLRKFNSENGRSLTLEASAIDVLMSCKFPGNVRELENCIERTA
TLSAGTSIVRSDFACSQGQCLSTTLWKSTSYGKTDPAAPMQPVPAKSIIPLAETAPPPQA
VCEPGSLAPSGTVLVSGARMADRERVVAAMEKSGWVQAKAARLLGLTPRQVGYALRKYGI
EIKRF
NT seq 1818 nt   +upstreamnt  +downstreamnt
atgcaaaacgaacctcgccaatccggacatgggtccagggaggatgatcaaggaaacgga
gacaggcttatgctgcatatcccctcctcgagcgaaagacctgcctcgcagccggaaccg
gagcgtgcccccccgggggagccgtcgcatgagagcgcgctggccggcatctacgaaata
tcgaaaatactaaatgctcccggccggctcgaagtcaccttggccaacgttctcggtctt
ctgcaatcgtttgtgcagatgcgacacggcctcgtctcgctgttcaacgatgacggcgtt
ccagaacttacagttggcgccggctggagcgaaggcactgacgaacgttaccggacgtgc
gtgccgcagaaagcaatccacgagatcgtagcgacaggcaggtctcttatggtcgagaat
gtagccgccgagacggccttcagcgctgccgaccgggaggttctcggcgcctctgatagt
ataccggtagcgttcatcggggtcccgattcgcgttgattcgacggtcgttggtacgctg
acgatcgaccgtatcccggaaggcagttcaagtcttctcgagtacgatgcgcggctgctc
gccatggtcgcgaacgtgataggacaaacgatcaagttacatcgcttgttcgccggcgat
cgcgaacaatcgttggtggacaaggaccggctagagaaacagacagttgatcgtgggccg
cccgctcgcgagcgcaagcagcttcaggcacacgggatcattggcgacagcccggcgctg
agcgcactgcttgagaagattgtcgttgtagccagatcaaacagcacggttctgctgcgt
ggcgaatccggtaccgggaaggagctggtagccaaggccattcacgagtcgtccgttcgt
gctaagcggccgttcgttaagctgaattgcgcggcgctccccgagacggtcctggaatcg
gaattgtttggccatgagaaaggtgcctttaccggtgctgtcagcgcccgcaaggggcgc
ttcgagcttgctgacaaagggacgctatttcttgacgagatcggagagatctcacctccg
ttccaggcgaagttgctgcgagttctgcaagagcaggagttcgagcgcgtcggcagcaat
cacacgattaaagtcgatgttcgggtgatagctgcgaccaacaggaaccttgaagaggct
gtggcaaggagcgaattccgcgcggacctctactatcgtattagcgtagttcccttgttg
ttgccgccgcttcgcgaaagacgcagtgatattccgctgctcgcaagagagttcctcaga
aagtttaacagcgagaacggccgctctcttactctggaggcgagtgcgatcgatgtactg
atgagctgtaaatttccgggaaatgtccgcgaactcgagaactgcatcgagcggaccgcg
acactcagtgccggaacatcgattgtaagaagtgactttgcatgcagccaaggccaatgc
ctttccacgacgctttggaaaagcacatcgtatggcaagacagacccggcggcaccgatg
caaccggtgcctgcaaagtccatcatcccgctggctgaaacggcccctccgccgcaggct
gtctgcgaaccgggctcattggcaccttccggcacagttctcgttagtggtgcgagaatg
gctgatcgcgagcgggtcgttgcggctatggaaaagtctggctgggtgcaggccaaggca
gcgcgcctactcgggctaaccccgcgccaagtcggctacgcgctgaggaaatacggaatc
gagataaagcggttctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (17)   
   Pfam (17)   
All databases (32)   

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