KEGG   Bradyrhizobium diazoefficiens USDA 110: blr8106
Entry
blr8106           CDS       T00109                                 
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
  KO
K01439  succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
Organism
bja  Bradyrhizobium diazoefficiens USDA 110
Pathway
bja00300  Lysine biosynthesis
bja01100  Metabolic pathways
bja01120  Microbial metabolism in diverse environments
bja01230  Biosynthesis of amino acids
Module
bja_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:bja00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    blr8106 (dapE)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:bja01002]
    blr8106 (dapE)
Enzymes [BR:bja01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.18  succinyl-diaminopimelate desuccinylase
     blr8106 (dapE)
Peptidases and inhibitors [BR:bja01002]
 Metallo peptidases
  Family M20
   blr8106 (dapE)
SSDB
Motif
Pfam: Peptidase_M20 M20_dimer
Other DBs
NCBI-ProteinID: BAC53371
UniProt: Q89BP2
Position
8898366..8899532
AA seq 388 aa
MTDALSIARDLIRCPSVTPADAGALGVLENALNAAGFTCHRVTFSEPGTADVDNLYARIG
SEGPHITFAGHTDVVPAGDESAWSVGAFSGEVKDGFLHGRGAVDMKGGIACSVAAVLEHL
AANGGKPRGDGTGSISFLITGDEEDVSINGTIKLLKWAAERGETFDHCVLGEPSNVETLG
DTIKVGRRGSQSGTLYVDGVQGHVAYPHRASNPVPDISRLIVAISDEPLDHGSAQFQASN
LEFTSVDVGNKANNVIPGEARAKFNIRYNDNHTQASLRELVETRLAKACGNRIKARIVWE
PSNSNVFVTKPGPFTDLAVSAIEEITGRKPELSTSGGTSDARFISSYCPVIEFGLVGQTM
HQVDERVPVKDLEKLTQVYRGILTRYFG
NT seq 1167 nt   +upstreamnt  +downstreamnt
atgaccgatgctctctcgattgcccgcgatctcatccgctgcccctcggtaaccccggcc
gatgccggcgcactcggggtgcttgaaaacgccctcaacgccgccggcttcacctgccac
cgcgtgacgttcagcgagcccggcaccgccgacgtcgacaatctctatgcgcggatcggc
agcgaagggccgcacatcaccttcgccggccacaccgacgtggtgccggctggcgacgag
agcgcctggagcgtcggcgcattctccggcgaggtgaaggacggttttctgcacggccgc
ggcgcggtcgacatgaagggcggcatcgcctgctcggtcgcagccgtgctggagcatctc
gccgccaacggcggcaagccgcgcggcgacggcacgggttcgatctcgttcctgatcacc
ggcgacgaggaagacgtctccatcaacggcaccatcaaacttctgaagtgggccgccgag
cgcggcgaaacattcgatcattgcgtgctgggcgagccctccaatgtcgagacgctcggc
gacaccatcaaggtcggccgacgcggctcgcaatccggcacgctgtatgtcgacggcgtg
cagggccatgtcgcctatccgcaccgcgcctccaatccggtgccggacatttcgcgattg
atcgtggcgatctccgacgagccgctcgaccacggcagcgcgcagttccaggcgtccaac
ctcgaattcacctcggtcgacgtcggcaacaaggccaacaacgtcatccccggcgaggcc
cgcgcaaaattcaacatccgctacaacgacaaccacacccaggcgagcctgcgcgagctg
gtcgaaacacggctggcaaaagcctgcggcaaccgcatcaaggcccgcatcgtctgggag
ccgtcgaactcgaacgtgttcgtgaccaagcccggcccgttcaccgatctcgcggtgtcc
gcgatcgaggagatcacggggcggaagccggagctgtcgacgagcggcggcacctcggac
gcgcgcttcatctccagctattgcccggtgatcgagttcggtctggtgggacagaccatg
caccaggtcgacgagcgcgtgccggtgaaggatctggagaagctgacgcaggtgtatcgg
gggatactgacgcggtattttgggtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (4)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (2)   
   Pfam (2)   
All databases (34)   

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