KEGG   Bradyrhizobium japonicum E109: RN69_16340
Entry
RN69_16340        CDS       T03509                                 
Name
(GenBank) type VI secretion protein
  KO
K11891  type VI secretion system protein ImpL
Organism
bjp  Bradyrhizobium japonicum E109
Pathway
bjp03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:bjp00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    RN69_16340
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:bjp02044]
    RN69_16340
Secretion system [BR:bjp02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   RN69_16340
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical
Other DBs
NCBI-ProteinID: AJA61739
UniProt: A0AA87R104
Position
3471355..3474891
AA seq 1178 aa
MLAKDILRIVLYGVGLSSLGAVIYLAGPFIAFGDWRPLENHIVRQIAILLLTTVVAGIVG
LNLFKRRKSAKEIADGIAGADQPVSDEPVLKERMKDALATLKTASGNKSGYLYDLPWYVI
IGPPGAGKTTALVNSGLKFPLARGATPAAIAGVGGTRYCDWWFTEEAVLIDTAGRYTTQD
SNSKADKDSWLAFLDILKKSRSRQPINGVLVAISIEDILTLPKQELALHADAIRMRLLEL
HQRLKVSFPVYALFTKADLVAGFTEYFAYLGEAGRRQVWGATFQTADKTQNLVGQIPVEF
DRLLERLSEETLDRLQDEPTPQHRVQLFGFPAQMARLKPQIHDFLNQIFEPTRYHVNANL
RGFYFTSGTQQGTPIDQLIGSLARTFGAEEVGSGSYSGAGKSFFLADLISKVIIGEADWV
STDRAAVRRALILKTAGLSLIGLVSIGLIAAWLMSYKRNSDLIEQSLQADSEYAAAGAPL
IKQTLIADHDLDKVLPLLYRLRNAPAGYGSRAQSVPLSARYGLSQHARLLSPSKAAYHTA
LERMFRPRLLYRLEEQLNARINEPAFVYEALKVYLMVGGLQSPDRELIRSWMQRDWVDNL
YPGATNAEGRRLLDENLVAMFDLETEQQPLVELDGRLIKQAQSSLARLSVSQRAYEFLKS
EARASTAGDWIASRHGGPDMGVVFETTTGQPLDAVRVPEFFTYNGFHQKFVARLSGLSER
MKRERWVLGDAGQQSAIDQQYDNLAGDLLNIYSNDFVTTWRTALGSLRLKKLLADKPKYE
VLRALSAPTSPMRQILESVRDETVLTKERAKPANASAQAAAPAPALFTNAQDGPPGATIE
AQFKPYHAALEGESTRRPIDSTVANLNDIAQNLTLIIENPQLTAQATAALQAQVAALRNN
ASRMPPPFSDMLRAAAAEFEGSIAASTAGQILQTLRDQVTPVCQQTVTNRYPFVRSSGQE
VPLADFAKLFSPNGVMDKFFTQYLAPYADTSRSDWAWRKESPVGRSFSPDTLKQFQNAAY
IRDAFFQTGGGVPAVSFAIRPPGAPGPGVTVKTEIGGTTIASPTIPGPATSSLFGGPQPT
PPPPPQSNSPTTVLWPGPAPRTAISVSNDTGAPSVLERIGPWSLFRMLEAGSLVVKAETA
SATFIVAGRELNYQISTGSLRNPLNLSVLREFRCPTGI
NT seq 3537 nt   +upstreamnt  +downstreamnt
atgcttgccaaggacattcttcgcatcgttctctacggagtagggctcagctcgctcgga
gcggtgatctatctcgccggtcccttcatcgcgttcggcgactggcggccgctggagaac
catatcgtccggcagatcgctattctgctgctcaccacggtcgtggcaggcatcgttggc
ctcaatctattcaagcgtcgcaagagtgccaaggagattgccgatggcatcgctggtgcg
gaccagcctgtcagcgatgaaccggtgctcaaggagcgcatgaaggatgcgctcgcgacg
ctgaagaccgccagcggcaacaagtcgggctatctctacgatctgccgtggtacgtcatc
atcggtccgcccggcgccggcaagaccacggcgctggtcaattccgggctcaaatttccg
ctcgcgcgcggggcgacgcccgcagcgatcgcgggagtcggtggtacgcgctactgcgat
tggtggtttaccgaggaggcggtgctgatcgataccgccggccgctacacgacccaggac
tccaacagcaaggccgacaaggacagctggctggcgttcctggacatcctgaagaaaagc
cggtcgcgccagccgatcaacggcgtcctcgtcgccatcagtatcgaagacatcctgacg
ctgccgaagcaggaactcgcacttcacgccgatgccatcaggatgcgcctgctcgagttg
catcagaggctcaaggtcagcttcccggtctacgcgctatttaccaaagccgatctcgtt
gccggcttcaccgagtatttcgcctatctcggggaggccggccggcgccaggtctggggt
gccacgttccagaccgcagacaagacccagaatctggtggggcagatcccggtcgagttc
gaccgtctgctggagcgcctgagcgaggagacgctcgaccgtctgcaggatgagccgacg
ccccagcaccgcgtgcaattgttcggctttccggcacagatggcgcggctcaagcctcag
atccacgacttcctcaaccagatcttcgagccgacgcgctatcacgtgaacgcgaacctg
cgcggtttctacttcacctcgggcacgcagcagggcacgccgatcgaccaattgatcggg
tcgctggcacgtacgttcggcgctgaggaggtcggttccggatcctattcgggcgcgggc
aagagcttcttcctcgccgatctgatttccaaggtcatcataggcgaggccgactgggtg
tcgaccgaccgtgccgcggtgcgccgcgcgctgatcctgaaaaccgcgggcctgtctttg
atcggcctggtctcgatcggactgatcgcagcttggctgatgagctacaagcggaactcc
gatttgatcgagcaaagcctgcaggcggatagcgagtatgcagccgccggcgcaccactt
atcaagcagacgctaattgccgatcatgatctcgacaaggtgctgccgctactctaccgg
ttgcgcaacgccccggcagggtacggatcgcgcgcccagtcggtgcctctgtcggctcgc
tacgggctcagtcagcacgcccggctgctgtcgccctcgaaggcggcctatcatacggcg
cttgagcgcatgtttcggccgcgcctgctgtatcgcctcgaggagcagctcaatgcgcgc
atcaacgaacctgccttcgtctacgaggcgctcaaggtctacttgatggtcggcggccta
cagtcgccagaccgcgagctgatccgctcctggatgcaacgtgactgggtggacaacctc
tatcctggcgccaccaacgcggaagggcggcgtctgctcgacgagaatctcgtggcaatg
ttcgacctcgagaccgagcagcagccgctggtcgaactcgacggccggctgatcaagcag
gcccagagctccttggcgcgcctgagcgtgtcgcaacgtgcctacgagtttctgaaatcg
gaggctcgcgcatcgaccgctggcgactggatcgctagccgccatggcggacccgacatg
ggtgtcgtgttcgaaaccacgacggggcagcctttggacgcggtgcgggtacctgagttc
ttcacgtataacggcttccatcagaagttcgtcgcccggctgtccggattgtctgagcgg
atgaagagggagcgatgggttttgggtgacgcaggccagcagtcagccatcgaccagcag
tacgacaatctggccggcgatctgctcaacatctattcgaacgatttcgtgacgacctgg
cgaacggcgctcgggagcctgcgcctgaagaagctgctcgccgacaagccgaaatacgag
gtgctgcgggcgctttcggcgccgacctcgccgatgcggcaaattctggaatcggtgcgc
gacgagacggtgctgaccaaggaacgggcgaagccggcgaacgcttcggcgcaagctgcc
gcaccggcgcccgcactcttcacgaacgcccaggatggaccgcctggcgcgacgatcgag
gcacagttcaaaccttaccacgcggcgctcgaaggcgagagcacccgccggccgatcgac
tcgacggtcgcaaacctgaacgacatcgcgcagaacctgacgttgatcattgagaatccc
caactgacagcacaggccacggctgcgcttcaggcccaggtcgcagcgctccgcaacaat
gcctcgcgcatgccgccgccattctccgacatgctgcgcgcagcagccgcggagttcgaa
ggcagcatcgcggcttcaaccgccgggcaaatcctgcaaacgttgcgcgatcaggtcacg
ccggtctgccaacagaccgtgaccaaccgctacccgtttgtccgcagcagcggccaggaa
gtcccgctggcggattttgccaaattgttcagtccgaatggcgttatggacaagttcttc
acccagtacctggcaccttatgccgatacgtcgcggtcggactgggcttggcgcaaggag
agccccgttggtcggtcgttctcgcccgacacgctcaaacaattccagaatgcggcttat
atccgggatgcgttcttccagacgggcggcggtgtgcccgccgtttctttcgcgatccgg
cctcctggggcaccgggcccaggcgtgaccgttaagaccgagatcggcggcaccacgatt
gcgagtccaaccattcccggaccggccacgtcgtccttgttcggcggtccgcaaccgacg
ccaccgccaccgccacagagcaactcgccaacgaccgtcctatggccgggcccggcgccc
cgaacggcaatctcagttagtaacgacaccggcgcgccatccgtgcttgagcgcattggt
ccctggtcgctatttcggatgctggaggcgggctcgttggttgtgaaagcggaaacggcc
agcgcgactttcatcgtcgcggggcgcgagctcaactatcaaatttcgactgggtcgttg
cgcaacccgctaaacctgtcagtgctgcgcgagtttcgttgcccgaccgggatatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (12)   

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