KEGG T03509: RN69

Bradyrhizobium japonicum E109: RN69_24360

Entry

RN69_24360        CDS       T03509

Name

(GenBank) tRNA (uracil-5-)-methyltransferase

K04094

methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]

Organism

bjp Bradyrhizobium japonicum E109

Brite

KEGG Orthology (KO) [BR:bjp00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:bjp03016]
    RN69_24360
   03036 Chromosome and associated proteins [BR:bjp03036]
    RN69_24360
Enzymes [BR:bjp01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.74  methylenetetrahydrofolate---tRNA-(uracil54-C5)-methyltransferase [NAD(P)H-oxidizing]
     RN69_24360
Transfer RNA biogenesis [BR:bjp03016]
Prokaryotic type
  tRNA modification factors
   Methyltransferases
    RN69_24360
Chromosome and associated proteins [BR:bjp03036]
Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    RN69_24360

SSDB

Motif

Pfam:

GIDA NAD_binding_8 3HCDH_N AlaDh_PNT_C DAO Pyr_redox_2 FAD_binding_2 FAD_oxidored

Other DBs

NCBI-ProteinID:

AJA63111

UniProt:

A0AA87QY76

Position

complement(5129569..5130996)

AA seq 475 aa
MTGPQSNIVHVIGAGLAGSEAAWQVAKSGVPVVLHEMRPDRMTEAHRTDGLAELVCSNSF
RSDDAANNAVGLLHAEMRRLGSLIMRAADANQVPAGGALAVDRDGFSAAVTKALNDHPLI
EIARGEVSGLPPADWSNVIVATGPLTSAPLANAIRELTDENALAFFDAIAPIVHRESIDM
SVAWFQSRYDKVGPGGTGADYINCPMTKEQYDGFVAALIAGEKTEFKEWETNTPYFDGCL
PIEVMAERGPETLRHGPMKPVGLTNPHDPTTKAYAIVQLRQDNKLGTLYNIVGFQTKLKY
GEQQRIFRGIPGLEKAEFARLGGLHRNTFLNSPKLLDGQLRLRAQPRLRFAGQMTGCEGY
VESASVGLIAGLYAAADARGETLASPPATTALGSLLGHITGGHIETIEPGTRSFQPMNIN
FGLFPPLANAPTKKPDGTRLRGNEKTVAKKQAMSALALADLDRWIADHLRIAAAA

NT seq 1428 nt +upstreamnt +downstreamnt
atgacaggaccccaatccaacattgtgcacgtgatcggcgccggccttgccggttccgaa
gccgcctggcaggtcgccaaatccggcgtgcccgtggtgctgcacgagatgcggccggac
cgcatgaccgaggcgcaccgcaccgatgggctcgctgagctcgtctgctccaattcgttc
cgctcggacgacgccgccaacaacgccgtcggcctgctgcacgctgaaatgcgccggcta
ggctcgctgatcatgcgcgcggccgacgccaaccaggtgcccgccggcggcgcgctcgcg
gtcgaccgcgacggcttctcggcggccgtcaccaaggcgctcaacgaccaccccctgatc
gagatcgcccgcggcgaggtttcaggcctgccgccggccgactggagcaacgtcatcgtt
gcgaccggccccctcacctccgcgccactcgccaacgccattcgcgagctcaccgacgag
aacgcgctcgccttcttcgacgcgatcgcgccgatcgtgcatcgcgagtccatcgacatg
tcggtggcctggttccagtcgcgctatgacaaggtcggccccggcggcaccggcgccgac
tacatcaactgccccatgaccaaggagcagtatgacggcttcgtcgccgcgctgatcgct
ggcgagaagacagagttcaaggaatgggagaccaacacgccctatttcgacggctgcctg
ccgatcgaggtgatggcggagcgcggccccgagacgttgcgccacggcccgatgaagccg
gtcggcctcaccaatccgcacgatcccaccacgaaggcctacgccatcgtgcagctgcgc
caggacaacaagctcggcacgctctacaacatcgtcggcttccagacgaagctgaaatac
ggcgagcagcagcgcatcttccgcggcattccggggctggagaaggccgaattcgcccgc
ctcggcggcctgcatcgcaacaccttcctcaattcgccaaagctgctcgacggccagctg
cgcctgcgtgcgcagccgcggctgcgcttcgccggtcagatgaccggctgcgagggctac
gtggaatccgccagcgtcggcctgatcgccggtctctatgcggcagcggatgcgcgcggc
gagacactggcgagcccgcctgctacgacggcacttggatcgctgctcggtcacatcacc
ggcggccatatcgagaccatcgagcccggtacgcgctcgttccagccgatgaacatcaat
ttcggcctgttcccgccgcttgcgaatgctccgacgaagaagcccgacggcacccgcctg
cgcggcaacgagaaaacggtggccaagaaacaggcgatgagcgcgctggcgctcgccgat
ctcgatcgctggatcgccgatcacctgcgcatcgccgcagccgcgtga

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (18)   

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