KEGG T03509: RN69

Bradyrhizobium japonicum E109: RN69_34670

Entry

RN69_34670        CDS       T03509

Name

(GenBank) RNA methyltransferase

K03215

23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]

Organism

bjp Bradyrhizobium japonicum E109

Brite

KEGG Orthology (KO) [BR:bjp00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:bjp03009]
    RN69_34670
Enzymes [BR:bjp01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     RN69_34670
Ribosome biogenesis [BR:bjp03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    RN69_34670

SSDB

Motif

Pfam:

tRNA_U5-meth_tr MTS Methyltransf_25 Met_10 Methyltransf_31 Cons_hypoth95

Other DBs

NCBI-ProteinID:

AJA64879

UniProt:

A0AA87R6V9

Position

7406406..7407653

AA seq 415 aa
MVERVRIDHVGHRGDGVSLAAGNAVYVPYALGGETVEVDHVAGNHPDRRKLLAVDVASPD
RIEPFCPHFGICGGCAIQHWAPAPYHAWKRGIVAETLAQAGIDCEVAPLVDAHGAGRRRV
TLHGRFGTHDVLKVGFSAASSHDVIPIHRCPILDPGLEGALDAAWALAESLTSRMSVTKP
LDIQVTATAHGLDVDVRGSGPLPTALITALSRVAEQHRLARLTRHGELVLQRLPPTVRMG
RAEVTLPPGSFLQATIAGEETLASLVAERVGKAKEVLDLFCGVGPFALRLAEKARVTAHD
NDAGAVAALVKAARTPGLKPIKAEPRDLFRRPLVPPELHDFDAVVFDPPRQGAQAQALKL
AASKVPVVIAVSCNAATFARDARLLIDGGYRIETVVPVDQFRHTPHVELVARFTR

NT seq 1248 nt +upstreamnt +downstreamnt
gtggttgagcgcgtgaggatcgatcacgtcggccatcgcggcgacggcgtctcgctcgct
gcgggcaatgccgtctacgtgccctacgcgcttggcggcgagaccgtcgaggtcgaccac
gtcgccggcaaccatcccgaccgccgcaagctgctcgcggtcgatgtcgccagccccgat
cgcatcgagccgttctgtccgcatttcggcatctgcggcggctgcgccatccagcactgg
gcgcccgcgccgtaccacgcctggaagcgcggcatcgtcgccgagacgctggcgcaggcc
ggcatcgattgcgaggtggcgccgctggtcgatgcccatggtgccggccgccggcgcgtc
acgctgcacggccggttcggcacgcatgacgtcctcaaggtcggcttctcggcggcgagc
tcgcacgacgtgatcccgatccaccgctgcccgatcctcgatcccgggctcgagggcgcg
ctcgacgccgcctgggcgcttgccgaatccctgacatccagaatgtcggtgacgaagcca
ctggacatccaggtcaccgcgaccgcccatggcctcgatgtcgacgtgcgcggttccggc
ccgctgccgacggcgctgatcacggcgctctcgcgcgtcgccgagcagcatcggctggcg
cggctgacgcggcacggcgagctggtgctgcaacgcctgccgccgacagtgcggatgggc
cgcgccgaggtgacgctgccgcccggctcgttcctgcaggcaacgatcgcgggcgaggag
acgttggcgtcgctcgtcgccgagcgtgtcggcaaggccaaggaggttctcgacctcttc
tgcggcgtcgggccgttcgctctccggctcgcggaaaaggcgcgcgtcaccgcccatgac
aacgacgccggtgccgtcgcagcgctcgtgaaggctgcgcgcacaccagggctgaagccg
atcaaggccgagccgcgcgacctgttccgccgcccgctggtgccgccggagctgcacgac
ttcgatgctgtcgtgttcgatcccccgcgccagggcgcgcaggcgcaggcgctgaaactc
gctgcgagcaaggtccccgtcgtgatcgcggtgtcctgcaacgccgcaaccttcgcccgc
gacgcccggctcctcatcgacggcggctacaggatcgagaccgtggtcccggtcgaccag
ttccgccacacgccgcatgtggaattggtggcacggttcacgcgctga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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