KEGG   Bradyrhizobium japonicum USDA 6: BJ6T_76470
Entry
BJ6T_76470        CDS       T01848                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
bju  Bradyrhizobium japonicum USDA 6
Brite
KEGG Orthology (KO) [BR:bju00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bju03021]
    BJ6T_76470
Transcription machinery [BR:bju03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BJ6T_76470
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_ECF HTH_23 Sigma70_r4 Terminase_5 HTH_28 TetR_C_31
Other DBs
NCBI-ProteinID: BAL12893
Position
complement(7903142..7903687)
AA seq 181 aa
MLTPAELVGLIGEVARGDQAAFERLYVATRAKLYGVVFRILRRQDLAEEVIQETYVKIWN
GAGQFNPALSSPITWMASIARNRAIDIVRKKTEVSIEEEPQAMEVAAESPDPLARREMTE
ELKRLLECIGRLEPDRQRLVLLAYYNGWSREQLAEKFAAPVNTVKTWLRRSMLDIRECLG
L
NT seq 546 nt   +upstreamnt  +downstreamnt
atgctgacgccagcagagctggtcgggctgattggggaggtcgcaaggggcgatcaggcc
gcgttcgagcgcctctacgtcgccacgcgcgcgaaactctatggcgtcgtgttccgtatc
ttgcgtcgacaggatctcgcagaggaggtcattcaggagacctacgtcaagatctggaac
ggcgcgggccagttcaatccggccttgtcgtcgccgatcacatggatggcatcgatcgcg
cgcaaccgcgccatcgacatcgtgcgcaagaagacggaagtctccatcgaggaagagccg
caggcgatggaagtcgctgccgagagccccgatccgctggcgcggagggaaatgaccgag
gagttgaagcggctcctggaatgcatcggccggctcgagccggatcgtcagaggctcgtg
cttctcgcctattacaacggctggagccgcgagcaattggccgaaaaattcgccgcgccc
gtcaacacggtgaagacgtggctccggcgcagcatgttggatatccgcgagtgcctcgga
ttgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (14)   

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