KEGG   Bifidobacterium catenulatum subsp. kashiwanohense JCM 15439 = DSM 21854: BBKW_0973
Entry
BBKW_0973         CDS       T04223                                 
Name
(GenBank) DNA topoisomerase
  KO
K03169  DNA topoisomerase III [EC:5.6.2.1]
Organism
bks  Bifidobacterium catenulatum subsp. kashiwanohense JCM 15439 = DSM 21854
Brite
KEGG Orthology (KO) [BR:bks00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bks03032]
    BBKW_0973
Enzymes [BR:bks01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     BBKW_0973
DNA replication proteins [BR:bks03032]
 Prokaryotic type
  DNA Topoisomerases
   BBKW_0973
SSDB
Motif
Pfam: Topoisom_bac Toprim_Crpt Toprim DUF3945 RlmA_N
Other DBs
NCBI-ProteinID: BAQ29108
Position
complement(1153510..1155669)
AA seq 719 aa
MKLVIAEKKSVATAIAQALCAAPVQRDGCYECGQLLVTWAQGHLIDLAMPEDYKDRDWRK
WSLDTLPVDPSGHWRWKISEERGAGSRYRQIVRLIRRTDVDCLVNACDPDREGEAIFRRI
ADMEGSHKPELRLWVASLEAEAIQAAWRAMKPESEYQGLAWSAEIRSKADWLIGMNASRA
YSLLCNARFSVGRVQTPTLAMIAERDRQIRNHKPVPFWTVIADMGGWRLSSERIDSKDAA
MLLCGQAEHGRFRIMSVNRRRVNDRPPRLYDLTGLQKDMSRLHGMTAARTLQALQHLYEL
KLATYPRTDSRYITHDDLETLTALLESGRLAHGFVTREGIPGHPRPELTVNDKKVAGHTA
ILPTMQLDAGKLEGLDDDERKVMTRIVRRMWEAVGDDHVHIVTEVKARLSDDTDREFSSR
SDETVSAGWKAVETGRGPEPEDEETADPAGGRNVIPSNLMEGGVIRPVGKVTVEEGETRP
PKPFTEATLLAAMEHASRYVEDKSLKAALDDDESHSGGIGTPATRADTIEKLVRSKLVER
KGRQLHATTEGERLTDVVEPRLKDVLLTARMEQALSDVEHGKRDPADVMDMFHREALRIP
ADATANLKADAVTRTTNTDAQDWGDCPRCGQPVRKTGRMWQCSTNKSEKTKDGKWIAVEG
CGWKMYARLAGKTITDQTARRLLAGQTVTLKGFTSKSGKKFDAAIRIDKLRGTAFDFDR
NT seq 2160 nt   +upstreamnt  +downstreamnt
atgaagctcgtcatcgcggaaaagaaatcggtcgccacggccatcgcgcaggcgttgtgc
gccgcgcccgtccaaagggacggatgctatgagtgcggccagctgctcgtgacatgggcg
cagggccacctgatcgaccttgccatgcccgaggactacaaggacagggattggaggaaa
tggagtctggacacgctgcctgtggacccgtccggccattggcggtggaagatcagcgag
gagcgcggtgccggctcccgctaccggcagatcgtgcggctgatccgccgaacggatgtg
gattgcctcgtcaacgcctgcgaccccgaccgcgagggtgaggccatcttccgccgcatc
gcggacatggaaggctctcacaagccggaactgcgcctgtgggtggcgagcctggaggcg
gaggccatccaggccgcgtggcgggcgatgaaacccgaatccgaataccaagggctcgca
tggtcggcggagatcaggtcgaaggcggactggctgatcggcatgaacgcgagccgcgcg
tactcgctgctctgcaacgcacggttcagcgtgggccgcgtgcagacgccgacgctcgcc
atgatcgcggaacgcgaccggcagatcaggaaccacaaaccggtgccgttctggaccgtg
atcgcggacatgggcggatggcggctctccagcgaacggatcgacagcaaggatgcggcg
atgctgctgtgcggccaggccgaacacggccgcttccgcatcatgtccgtgaaccggagg
cgggtgaacgaccggccgccccgcctgtatgacctgaccggattgcagaaggacatgagc
cggttgcacggcatgaccgccgcacgcacgctccaggcgttgcagcacctctacgaactc
aaactcgccacctatccgcgcaccgacagccggtacatcacgcacgacgacctcgaaacg
ctcacggcgctcctcgaatccggccgtctcgcccacgggttcgtcacccgcgagggcata
cccggacacccgcgcccggaactcaccgtcaacgacaagaaggtggccggccacaccgcg
atcctgccgaccatgcaattggacgccgggaagctggaaggcctggacgatgacgaacgc
aaggtgatgacgcgcatcgtgcgccgcatgtgggaggccgtgggcgacgaccatgtgcac
atcgtcaccgaggtgaaggcacggctttccgacgacaccgatagggagttctccagccgt
tccgacgagaccgtatccgcaggatggaaggccgtcgaaaccggccgcgggcccgaaccg
gaagacgaggaaacagcagacccggcgggaggaaggaacgtgatcccgtcgaacctcatg
gaaggcggcgtcattcgcccggtcgggaaggtcacggtcgaggaaggcgagacccgcccg
cccaaaccgttcaccgaggccacgctgctggccgcgatggagcacgcgagccggtacgtg
gaggacaaaagcctcaaggcggcgctcgatgacgacgaatcacattccggcggcatcggc
acgccagccacccgcgcggacaccatcgaaaagctcgtgcgctccaaactcgtggaacgc
aagggccgtcagctccacgccaccacggaaggcgaacgcctcaccgacgtggtggagcca
cgcctgaaggacgtgctgctcaccgcgcggatggaacaggcgctctccgacgtggaacac
ggcaaacgggacccggccgacgtgatggacatgttccaccgggaggcattgcgaatcccc
gccgacgcgaccgcgaacctcaaggccgatgctgtcacacgaaccacgaacaccgacgcg
caggattggggcgactgcccgcgctgcggccagccggtcaggaaaaccggccggatgtgg
caatgctccacgaacaaaagcgagaagaccaaggacggcaagtggatcgccgtcgaggga
tgcggctggaagatgtacgcgaggctcgcgggcaagaccatcaccgaccagaccgcacgc
aggctcctcgcgggacagaccgtcacgctgaagggcttcacatccaaatccgggaagaag
ttcgacgcggccatccgcatcgacaagttacgcggcacggcgttcgacttcgaccgctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

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