KEGG   Bifidobacterium catenulatum subsp. kashiwanohense JCM 15439 = DSM 21854: BBKW_1090
Entry
BBKW_1090         CDS       T04223                                 
Name
(GenBank) pseudouridine synthase
  KO
K06178  23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
Organism
bks  Bifidobacterium catenulatum subsp. kashiwanohense JCM 15439 = DSM 21854
Brite
KEGG Orthology (KO) [BR:bks00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:bks03009]
    BBKW_1090
Enzymes [BR:bks01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.22  23S rRNA pseudouridine2605 synthase
     BBKW_1090
Ribosome biogenesis [BR:bks03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    BBKW_1090
SSDB
Motif
Pfam: PseudoU_synth_2 S4
Other DBs
NCBI-ProteinID: BAQ29225
Position
complement(1275502..1276275)
AA seq 257 aa
MPNAYSRAAKAHTHDNEGIRLQKLLAQAGFGSRRKCEEIITEGRVEIDGELVTELGTRVD
PKHQEVRVDGSRVRVNPNHVTLALNKPKRVLSAMEDPKGRYTLSDIVGDKYDRIFHMGRL
DYDSEGLILMTNDGELSQHVMHPKYEVEKTYIATLEGRISGQVCRRLVTTGVQLDDGWIK
LDRCAILDASRDSTLVKVVLHSGKNRIVRRIFGSIGFPVRRLVRTQIGPIKLGDLKSGSY
RVLSQTEVRSLSKAVGL
NT seq 774 nt   +upstreamnt  +downstreamnt
atgccaaacgcatattcccgcgccgcgaaggcgcatacacatgacaatgaaggtatccgc
ctgcagaagcttcttgctcaggcaggttttgggtcccgtcgcaaatgtgaagagatcatt
actgaaggacgcgtcgaaatcgacggtgagcttgtcaccgagttggggactcgcgtcgac
ccgaaacatcaggaggttcgtgtggacggctcccgtgttcgtgtgaaccccaatcatgtc
acgcttgccttgaacaagccgaagcgcgtactcagcgccatggaggatccgaagggacgt
tacaccctgagcgatatcgtcggcgacaagtatgaccgtattttccacatgggtcgtctg
gattacgattccgaaggcctgattctcatgacgaacgacggcgagttgagccaacatgtc
atgcaccccaaatatgaggtcgagaaaacctatattgccacgttggaaggtcgcatcagc
ggtcaggtgtgccgccgactggtcaccaccggcgtgcagctcgacgacggttggatcaag
cttgaccgttgcgcgattcttgatgccagccgcgatagcactctggtcaaggtggtgctg
cactccggcaagaaccgtattgttcgtcgtatcttcggatcgatcggtttcccggtcaga
cgtttggtgcgcactcagatcggcccgattaaacttggcgatctgaagtccggatcgtac
cgtgtgctttcgcagactgaggtgcgttccctgtccaaggcggtgggcctgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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