KEGG   Bifidobacterium catenulatum subsp. kashiwanohense JCM 15439 = DSM 21854: BBKW_1334
Entry
BBKW_1334         CDS       T04223                                 
Name
(GenBank) recombinase RecA
  KO
K03553  recombination protein RecA
Organism
bks  Bifidobacterium catenulatum subsp. kashiwanohense JCM 15439 = DSM 21854
Pathway
bks03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bks00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    BBKW_1334
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bks03400]
    BBKW_1334
DNA repair and recombination proteins [BR:bks03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     BBKW_1334
    RecFOR pathway proteins
     BBKW_1334
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    BBKW_1334
SSDB
Motif
Pfam: RecA RecA_C ATPase Rad51 ATPase_2 AAA_24 AAA_25 AAA_16 AAA DnaB_C ABC_tran AAA_35 AAA_22 AAA_14 nSTAND3
Other DBs
NCBI-ProteinID: BAQ29469
Position
complement(1552846..1554030)
AA seq 394 aa
MAQTSTAKGAAQNKSANGIDPRRQAALDTALAQVEKSFGKGSAMRLGDRPEQDVEVIPTG
SLALDMALGIGGLPKGRIVEIYGPESSGKTTLALHVVANAQKSGGVAAFIDAEHALDPVY
ARKLGVDTDSLIVSQPDNGEQALEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSH
VGLQARLMSQALRKMTGALAQAGTTAIFINQLREKIGVFFGNPETTTGGKALKFYSSVRM
DIRRIQTIKNGDEAVGNRTKVKVVKNKMAPPFKTAEFDVLYGEGISKEGSVLDMALQVNV
VKKSGSWFTYDGDQLGQGRENVRQFLKDNPELTAEIENKVKAEFGLIEPTDQFAEDGDDV
SAKDVKGEEKAKADAAKPETAKGAAKSSKPADKA
NT seq 1185 nt   +upstreamnt  +downstreamnt
atggcacagacgagcacggcaaagggagccgcacagaacaagtccgcgaacggcatcgac
ccgcgtcgtcaggccgcgctcgatacggcgcttgcgcaggtcgagaagagtttcggcaaa
gggtcggccatgcgattaggcgatcgtcctgagcaggatgttgaggtgattccaaccgga
tcgctagcgttggatatggcattgggcatcggaggtttgccgaagggccgtattgtggag
atctatggcccggaatcctccggcaagaccacgctggcgctgcatgtggtggccaatgcc
cagaaaagcggtggggtcgccgcgttcatcgatgcggagcatgcgcttgatcctgtctat
gcgcgcaagcttggcgtcgacacggattcgctgatcgtctcccagcccgataacggcgaa
caggcgctggagatcgcggatatgctgattcgttccggtgcgcttgacgtgattgtcatc
gattccgtggcggcattggtgccgaaggccgaaatcgaaggtgaaatgggcgacagtcac
gtcggtttgcaggcgcgactgatgagccaggcattgcgtaagatgactggcgctttggct
caggcaggtaccacggccatcttcatcaatcagctccgtgagaagatcggcgtgttcttt
ggcaatccggaaacgaccaccggtggcaaggcgttgaagttctactcgtccgtccgcatg
gatattcgtcgcatccagaccatcaagaacggcgacgaggctgtgggcaaccgtaccaag
gtcaaggtcgtcaagaacaagatggctccaccgttcaagactgctgagttcgacgtgctg
tacggcgaggggatttccaaagaaggatctgtgcttgacatggcgttgcaggtcaatgtc
gtgaagaagtccggatcgtggttcacgtatgatggcgaccaactggggcaggggcgtgag
aacgtgcgtcagttcctcaaagacaacccggagcttactgcagagattgagaataaggtg
aaagccgaattcggactcattgagcctactgaccaattcgccgaggatggtgacgatgtg
tcggcgaaggatgtgaaaggcgaggaaaaggcgaaagctgatgctgccaagccggaaacg
gctaagggcgcggcaaagtcttccaagcctgccgacaaggcatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (15)   
   Pfam (15)   
All databases (22)   

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