KEGG   Burkholderia latens: WK25_05350
Entry
WK25_05350        CDS       T04819                                 
Name
(GenBank) RNA polymerase sigma factor RpoE
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
blat  Burkholderia latens
Brite
KEGG Orthology (KO) [BR:blat00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:blat03021]
    WK25_05350
Transcription machinery [BR:blat03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     WK25_05350
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_r4 Sigma70_ECF HTH_23 HTH_16 Phage_antitermQ IDEAL HTH_WhiA
Other DBs
NCBI-ProteinID: AOK03940
UniProt: A0A1B4NQM0
Position
1:1136242..1136841
AA seq 199 aa
MSEKEIDQALVERVQKGDKAAFELLVSKYHRKIIRLISRLVRDPAEVEDVAQDAFIKAYR
ALPQFRGESAFYTWLYRIAVNTAKNYLATQGRRAPTSTEADAEEAETFSDADQLRDINTP
ESMLMSKQIAETVNAAMALLPEELRQAITLREIEGLSYEEIAEMMDCPIGTVRSRIFRAR
EAIAAKLRPLLDTPEGKRW
NT seq 600 nt   +upstreamnt  +downstreamnt
gtgagtgaaaaagaaatcgatcaggctctggtcgagcgcgtacagaagggcgacaaggca
gcgttcgaactcctggtctccaaataccaccgcaagatcattcggctgatctcgcgcctc
gtgcgggatcccgccgaggtcgaggatgtggcccaggacgcgttcatcaaggcgtatcgt
gcgctgccgcaatttcgcggcgagtcggcgttctacacgtggttgtaccggattgccgtc
aatacggcgaagaactaccttgcgacgcagggccgccgggcgccgacctcgaccgaggcc
gatgccgaggaagctgaaactttctcggacgcagaccaactaagggatatcaacacgcct
gagtcgatgttgatgagcaagcagattgccgagacggtcaacgctgcgatggctctgttg
cccgaagaactgcgccaggcaatcacgctgcgcgagatcgaaggcctgagctacgaagag
atcgcggaaatgatggattgtccgatcgggacggtccggtcgcgaatcttccgtgcgcgc
gaggcgatcgctgcgaaattgcgtccgctgctcgatacgcccgaaggcaagcgctggtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (16)   

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