KEGG   Bifidobacterium longum subsp. longum BBMN68: BBMN68_697
Entry
BBMN68_697        CDS       T01345                                 
Symbol
rnd
Name
(GenBank) Rnd
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
blb  Bifidobacterium longum subsp. longum BBMN68
Brite
KEGG Orthology (KO) [BR:blb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:blb03016]
    BBMN68_697 (rnd)
Enzymes [BR:blb01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     BBMN68_697 (rnd)
Transfer RNA biogenesis [BR:blb03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    BBMN68_697 (rnd)
SSDB
Motif
Pfam: DNA_pol_A_exo1 DNA_pol_A_exoN HRDC
Other DBs
NCBI-ProteinID: ADQ03432
Position
complement(792353..793579)
AA seq 408 aa
MDGYHRVCDALAEATGSLAADAERASGFRYGHEDWLIQFKREGAGIALLDPVALTRAGAD
WNEFNDAVGDATWILHDSLMDLPGFAEIGLKPKALFDTEIAARLLGLHRFGLAAVTEHYL
GITLAKEHSAADWSYRPLPRDWRNYAALDVEVLIELETMMRRDLKAAGKDEWAAEEFSHA
LVAGLAPRKPHPIPWLRISRITQLSRDPRGLAIAKSLWEERDRLARQYDIAPSLLLADSS
IIEAATNKPHNAAQFRALRSLNERVRIHTGTEQDKMFERYAPIQRAVKPKVWKQAIDRAM
ALKPTQWPTMPAPEQDENGVVNAPRSMRLWQQRHPERYDRLQRVRRVINRIAEDTRTPAE
MIIKPQILRNLCWVEDPVEVDVETFLIEQGARNWQVKLIAPSVSGVIM
NT seq 1227 nt   +upstreamnt  +downstreamnt
ttggacggctatcatcgtgtctgcgatgcgctggccgaggcgacgggctcgctggccgcc
gacgccgaacgggcgtccggcttccgctatggacacgaggattggctgattcagttcaaa
cgtgagggtgcaggcatcgccttgcttgatcccgtcgccctgacccgggccggagctgat
tggaatgaattcaatgacgccgtgggcgacgccacgtggattctgcatgattctctgatg
gacttgcccggattcgccgaaatcgggctcaaacccaaagccctgttcgacacggaaata
gcggcgcgattgctcggcctgcaccgcttcggtctggccgccgtcaccgaacactacctc
ggcatcacgctagccaaagagcactccgccgccgattggtcctaccgtccgctgccgcgc
gactggcgcaactatgctgcgctcgacgtggaggtgcttatcgaacttgaaaccatgatg
cgtcgtgacctgaaagccgcaggcaaggacgagtgggccgctgaagagttttctcacgct
ttggttgcgggccttgccccgcgcaaaccgcatccgattccttggctgcgtatctcgcgc
atcacccagctgagtcgtgatccaaggggcctggccatcgccaaatccctatgggaggag
cgcgaccgactcgcccggcaatacgatattgcgcccagcctgttattggccgattcatca
atcatcgaggcggcgacaaacaagccgcacaatgctgcccaattccgcgcgctccgatcc
ctgaacgagcgtgtgcgcatccataccggcaccgagcaggacaaaatgttcgagcggtac
gcgccgattcagcgtgcggtcaaaccgaaggtctggaagcaggccatcgatcgagccatg
gccctgaagcccacccaatggcctaccatgcccgcccccgaacaggacgaaaacggtgtg
gtgaacgcgccccgatccatgcggctgtggcaacagcgccatccggagcgttatgaccgt
ctgcaacgggtacggcgtgtgatcaaccgcatcgccgaagacacccgcacgccggccgag
atgatcatcaagccacagatcctacgcaatctgtgctgggtggaagacccggtggaagtg
gacgtcgagacgttcctgatcgagcagggcgcaaggaactggcaagtgaaactcattgca
ccgtccgtaagtggcgttatcatgtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

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