KEGG T00923: Balac

Bifidobacterium animalis subsp. lactis Bl-04: Balac_0003

Entry

Balac_0003        CDS       T00923

Name

(GenBank) recombination protein RecF

K03629

DNA replication and repair protein RecF

Organism

blc Bifidobacterium animalis subsp. lactis Bl-04

Pathway

blc03440

Homologous recombination

Brite

KEGG Orthology (KO) [BR:blc00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Balac_0003
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:blc03400]
    Balac_0003
DNA repair and recombination proteins [BR:blc03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     Balac_0003

SSDB

Motif

Pfam:

SMC_N AAA_23 AAA_21 AAA_15 SbcC_Walker_B AAA_27 AAA_13

Other DBs

NCBI-ProteinID:

ACS45401

Position

3659..5086

AA seq 475 aa
MITVSRLALDHFRSWTNCVLDFKPGVNILEGPNGLGKTNIVEALEVLSTGSSHRASTSQP
LVEQGFPAAAIRANIEELSEDFENNTETIDDRTTTFELTIRVRGANRARVDGGPSLYMRD
IVGRVPLVAFTPDDQRLVWGDPAVRRSFIDQAASVLVRGYTDLLQRFTHIAKQRAALLKQ
IGAQEGVSVSEEARQMRMNGLEVWTAQFIETGLELTRQRMAVIGMLNEYFGTIVQELSDV
DQTATLVYEPSFDELYLTQGAEAGEQGGPERVKAAISEHFQRIYTGEVARGVNLIGPQRD
DVSIELNGMPAREYSSNGESWTLALALKMALYRLLERKAGERPIVVLDDVFAQLDPSRRA
KIMEFALRQDQVIITVAAAGDVPELPGDAHAHVIDVAALKLQGSGGEGTAFMPEPLPADD
PFAGQLAAVQASRRTAGMHAGSDGKHKVEQSADQSAEQVSGEREIGLTKHESAHA

NT seq 1428 nt +upstreamnt +downstreamnt
atgatcaccgtatctcggctggcgcttgaccacttccgttcctggacgaattgcgtgctg
gatttcaaaccgggtgtcaacattctggaaggcccgaatggactcggcaaaacgaacatc
gtcgaggcgctcgaggtgctgtccaccggctccagccatcgcgcctcaacgtctcagcca
ctcgtcgagcaagggttccccgcagccgccattcgcgcgaatatagaagaactatcggaa
gatttcgaaaacaacaccgagacaatagatgaccggacgaccaccttcgagctgacgatt
cgggtgcggggagccaaccgtgcccgcgtggacggcggtccgagcctgtatatgcgagac
attgtggggcgcgtgcccctcgtcgcattcactcccgacgaccagcgtctggtgtggggc
gaccctgccgtgcgccgttcgttcatcgatcaggccgccagcgtgctggttcgcggctat
accgacctgttgcaacgcttcacgcatatcgccaagcaacgcgcggcgctactcaagcaa
atcggtgcgcaggagggcgtctcggtgtccgaggaggcgcgccagatgcgcatgaacggc
ttggaggtgtggaccgcacagttcattgaaaccggtctggaactcacccgacagcgcatg
gcagtcatcggcatgctcaacgaatatttcggaacaatcgtacaggaattaagtgatgtc
gatcaaacggcgacgctcgtgtatgagccgtcgttcgacgagctatacctcacccaaggg
gccgaggcaggggagcaaggcggtcccgagcgggtgaaggcggcgatcagcgagcatttc
cagcgcatctacacgggggaggtggcgcgtggggtgaatctgatcggaccccagcgtgac
gacgtctcgattgagctcaacggcatgccggcacgcgaatactcgtcgaacggagaaagc
tggacgctggcgctggccttgaaaatggccctctaccgtcttctggaacgcaaggcgggg
gaacggcccatcgtggtgctcgacgatgtgttcgcgcagctggacccgtcacgtcgtgcg
aaaatcatggaattcgcgttgaggcaggaccaggtgatcatcaccgttgcggcggccggc
gacgtgccggaactgcctggcgacgcccatgcccatgtgatcgatgtggcggcattgaag
ctgcaggggagtggcggcgaaggcaccgctttcatgccggagccactgccggccgacgac
cccttcgccggtcagctggccgccgtgcaagcctcccggcgaaccgctggcatgcatgca
ggcagtgatggcaaacataaggtcgaacaatctgcagaccaatcggcagaacaggtttcg
ggtgagcgtgaaattggtctgacgaaacatgaaagtgcacacgcatga

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (14)   

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