KEGG   Bifidobacterium animalis subsp. lactis Bl-04: Balac_0301
Entry
Balac_0301        CDS       T00923                                 
Name
(GenBank) ribonuclease G
  KO
K08300  ribonuclease E [EC:3.1.26.12]
Organism
blc  Bifidobacterium animalis subsp. lactis Bl-04
Pathway
blc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:blc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Balac_0301
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:blc03019]
    Balac_0301
   03009 Ribosome biogenesis [BR:blc03009]
    Balac_0301
Enzymes [BR:blc01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.12  ribonuclease E
     Balac_0301
Messenger RNA biogenesis [BR:blc03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     Balac_0301
Ribosome biogenesis [BR:blc03009]
 Prokaryotic type
  rRNA processing factors
   Balac_0301
SSDB
Motif
Pfam: RNase_E_G DnaJ_CXXCXGXG
Other DBs
NCBI-ProteinID: ACS45690
Position
368580..371666
AA seq 1028 aa
MPDLTENGLGSPEFDNTDTTNTTNDSTPTRRRRGRRVVRGAGEAGAQMQLEVHDRVPLFQ
EPSAAIEAGKPTKALPAGSHEEESAESGDSNEPTATRRRSRRASTSTRSRSTRTTNDEAE
EPTTTRSRRGRGAAQNDDEEPTVHTRRRSRAQADEAEEPRSTHSRRSRRTVSDESEQTND
DSYESRTQHVLDALDESFDDDAETHETGRGRSRSRSRSTSRSRTSRREVLEDADQHESAD
VENDEEESSARGNRRAGRPMTSLLFQEPVLPARSRSTHDEENDEGSDDEPLHDLDLNEGS
TRSRKRSRNRRLNAQERRAAAEVEQIEEDLVLDDIVYAPIDDETGKSGDESDSEESGIHT
RRRRRRKSQENANAEREESENEEGTRTRRRSRAEDEEENDESTVTRRRRRRRNSKGGEEE
EQPRRSRKQQYIDEITDVEGSTRLEAKKQRRRDNRRERSRQNQLLEQDFLARRENVDRLM
VVRERGRHTQISVIEDNVLVEHYVSDIQEVATVGNIYLGRVQNVLPSMEAAFVDIGQARN
GVLYAGEVNWDATRLEGQPRRIELAFKSGDPVLVQVTKDPIGHKGARLTSQVTLAGRFLV
LVPSGGMTGVSRKLSDRERNRLKSIVSKIAPKDMGVIIRTAAEGASEEAIAKDLEGLTNQ
WAEIQRKREEFLHGKRPKLLQGEPDVAIRVVRDIFNDDFNKMIVEGDGVYHRIEEYLDHM
APDLHNKLERWDPEEHGGKDVFDRWQIDSQLRKGMERQVYLPSGGSIVIDRTEAMTTIDV
NTGRFIGKGKSLEETVTRCNLEASEEIARQLRLRDIGGMVMIDYVDMVMPANRDLVLRRL
VECLARDRTKHQVAEVTSLGLVQMTRKRIGQGLVEAFSEECPECKGRGFIVHDEPTISAE
FDDPYAMKGGDPFVRTNKHGHGTPEVHAPKGSSAAVKAKLAQIAAAAVAANVAAEAEESV
EAPAADTTEETAKVDVAVESTVESAAESAGNAGDTERVEQVEGEVIDDAEQSADDAAAVT
VEDAAEES
NT seq 3087 nt   +upstreamnt  +downstreamnt
atgcccgatttgaccgagaacggcttgggttcgcccgagttcgacaataccgataccacc
aacaccaccaacgattccacccccacacgccgccgtcgcggacgccgtgtggtgagaggc
gccggcgaggcgggcgcccagatgcagctcgaagtgcacgaccgcgtgccgctgttccag
gaaccaagcgccgcaatcgaagccggcaagccgaccaaggcgcttcctgcgggcagccac
gaggaggaatccgcggaatccggagactccaacgagcctacggcaacgcgccgccgctcg
cgccgtgccagcacctccaccaggtcgcgcagcacgcgcaccacgaatgacgaggcagag
gagcccacgacgacgcgttcgcgccggggccggggcgcggcacagaacgatgatgaggag
ccgaccgttcatacgcgccgccgctcgcgtgcgcaggcagacgaagccgaggagccgcgc
agcacccattcgcgtcgaagccgccgcacggtgtccgacgaatctgagcagaccaatgac
gacagctatgagagccgcacccagcacgtgcttgatgcgttagatgagtctttcgacgac
gatgccgagacccacgagaccggccgcggccgttcacgctcgcgttcccgttccacctcc
cgttcccgcacaagccgtcgtgaggtgctcgaagacgcggatcagcatgaatctgcagat
gtggagaacgacgaggaggaaagcagcgcgcgcggcaatcgccgtgccggccgcccgatg
acctccctgctgttccaggagccggtgctgccggcacgttcgcgttccacccacgacgag
gagaatgacgaaggctccgacgacgagccgctgcacgatctcgatctcaacgaaggcagc
acccgctcccgcaagcgttcacgcaatcgccgactgaacgcgcaggagcgccgcgcggcc
gccgaagtcgagcaaatcgaggaagacctcgtgctcgacgacatcgtctatgcgcctatc
gacgacgaaaccggaaagtcgggcgacgaatccgacagcgaggagagcggcatccatacg
cgtcgccgtcgccgccgtaagtcgcaggagaacgcgaatgcggaacgcgaggaatccgag
aacgaggagggcacccgcacccgtcgccgttcgcgcgccgaggacgaggaggagaatgac
gagagcacggtgacgcgtcgccgtcgccgtcgccgcaactcgaagggcggtgaggaagag
gaacagccacgccgttcacgcaagcagcagtacatcgatgagatcaccgatgtcgaaggc
tcgacgcgtctcgaggcgaagaagcagcgccgtcgcgacaaccgccgtgaacgcagccgc
cagaaccagctgctcgaacaggacttcctcgcgcgccgcgagaacgtggaccggctcatg
gtcgtgcgtgaacgtggacgccatacgcagatctcggtgatcgaagacaacgtgctcgtc
gagcattacgtctccgacatccaagaggtcgccaccgtgggcaacatctaccttggccgt
gtgcagaatgtgctgccgagcatggaggccgcattcgtggacatcggtcaggcccgcaac
ggcgtgctgtatgccggcgaggtgaactgggacgccacgcgtttggagggtcagccgcgc
aggatcgaactcgcattcaagtcgggcgatcccgtgctcgtgcaggtgacgaaagacccg
atcgggcacaagggcgcacgactgacgagccaggtgacgctcgccgggcgcttccttgtg
ctcgtgccatccggcggcatgaccggcgtgagccgcaagctcagcgaccgcgaacgcaac
cgcctgaagtcgatcgtctcgaagatcgcaccgaaggacatgggcgtgatcattcgcacc
gcggccgagggagcgtccgaagaggcgattgcgaaggatctcgaggggctgaccaaccag
tgggccgagattcagcgcaagcgcgaggagttcctgcacggcaagcgtccgaagctgctg
cagggcgagcctgacgtggcgattcgcgtggtgcgcgacattttcaacgacgacttcaac
aagatgattgtggaaggcgacggcgtgtaccaccgcatcgaggagtacctcgaccacatg
gcacccgatttgcataacaagctcgagagatgggacccggaagagcacggcggaaaggac
gtgttcgacaggtggcagatcgactcgcagctgcgcaagggcatggaacgccaggtctac
ctgcccagtggcggctccattgtgatcgaccgcaccgaggcaatgacgacgatcgacgtg
aataccggacgtttcatcggcaagggcaagtcgctcgaggagacggtgacgcgatgcaat
ctggaggcgagcgaggagatcgcgcgccagttgcgcctgcgtgacatcggcggcatggtc
atgatcgactatgtggatatggtgatgccggcgaaccgcgacctcgtgctgcgtcgtctg
gtggaatgcctggcccgcgaccgcaccaagcaccaggtggccgaggtgacgtcgctcgga
ctcgtgcagatgacgcgcaagcgcatcgggcaggggctcgtcgaggcgttctccgaggag
tgcccggagtgcaagggacgcgggttcattgtgcatgacgagcccacgatctccgcggaa
ttcgacgatccgtacgcgatgaagggcggcgatccgttcgtgcgcacgaacaagcacggg
catggcacgcccgaagtacatgcgccgaagggctcgtccgcggcggtcaaggccaagctc
gcgcagattgccgccgcggcggtggctgcgaatgtggccgcggaggccgaggagagtgtg
gaggctccggcggccgacacgacggaggaaaccgccaaggtcgacgtggcagtggaatcc
accgtggaatctgcggcggaatctgcaggcaacgctggcgacaccgaacgcgtcgagcag
gtcgaaggcgaagtgatcgacgacgccgagcaatctgccgatgacgccgccgcggtgacg
gtggaggacgcggccgaggaatcctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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