KEGG   Bifidobacterium longum subsp. infantis 157F: BLIF_0143
Entry
BLIF_0143         CDS       T01420                                 
Name
(GenBank) DNA polymerase III delta' subunit
  KO
K02341  DNA polymerase III subunit delta' [EC:2.7.7.7]
Organism
blf  Bifidobacterium longum subsp. infantis 157F
Pathway
blf03030  DNA replication
blf03430  Mismatch repair
blf03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:blf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BLIF_0143
   03430 Mismatch repair
    BLIF_0143
   03440 Homologous recombination
    BLIF_0143
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:blf03032]
    BLIF_0143
   03400 DNA repair and recombination proteins [BR:blf03400]
    BLIF_0143
Enzymes [BR:blf01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BLIF_0143
DNA replication proteins [BR:blf03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     BLIF_0143
DNA repair and recombination proteins [BR:blf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     BLIF_0143
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA AAA_5 AAA_16 T3SSipB NolB AAA_22 DNApol3-delta_C KTI12 Rap1a
Other DBs
NCBI-ProteinID: BAJ70290
Position
185088..186239
AA seq 383 aa
MSVWDSLVGQKPVIDMLSRIAQGDPSQITQSWLICGPPGSGRSNMARAFAAALESPDHGM
SAEPTRVTQQVLAGTHPDVTVLATNKVTIGIDQVREIITASEQMPATAPWRIIIIEDVDR
MLERTTNVLLKEIEEPAEHCIWLLCAPSAQDVLPTIRSRTRIVNLAVPSTQAVAGFLTST
TNVEPKVAQRAARLAEGHIGIAKLYATDERVMSDRDELVVGVLNLARASDAVLLAGNLID
NAKAQAEADANRITAGQEAEFRRINGLAPSDRIPPKLRGAFNQIAKKDDVKRLVTRRTRD
VLDRALNSIASIYRDVAVLQNNAEDSVGLINLENRSSITELSVRLNRAGAVTRLDEVAHA
RKRLAGNGNPLLVFESLFCALIS
NT seq 1152 nt   +upstreamnt  +downstreamnt
atgagcgtatgggattcactagtcggccaaaagccggtaatcgacatgctcagtcgtatc
gcgcagggcgacccgagccagatcacccagtcgtggctgatctgtggacctcccggatcg
ggccgttccaacatggctcgtgcgtttgcggcggcgctggaaagcccggatcacggcatg
agcgctgagcccacgcgcgtcacccagcaggtgcttgccggcacgcatccggatgtcaca
gtgctggccaccaacaaagtgaccatcggcatcgaccaggtgcgcgagatcatcaccgcc
tccgagcaaatgcctgccacggcaccgtggcgcatcatcatcatcgaagacgtggatcgc
atgcttgagcgcaccaccaacgtgctcttgaaagagattgaggagccggccgagcattgc
atctggctactgtgcgcgcccagcgcccaggacgtgctgcccaccatccgctcgcgcaca
cgcatcgtgaacctcgccgtgccctccacccaggcggtggccggattcctgacctccacc
accaatgtcgagccaaaagtggcgcagcgtgcggcccgactcgccgaaggccatatcggc
atcgccaagttgtacgccaccgacgaacgggttatgtccgaccgcgatgaacttgtggtc
ggtgtgctgaatctggcccgtgcctcggatgcagtgttgttggccggcaatcttatcgac
aatgccaaggcccaggccgaggcagacgcgaaccgcatcaccgccggtcaggaagcggaa
ttccgccgcatcaacggactggcaccgagcgaccgcatcccgccgaaactgcgtggcgca
ttcaaccagattgccaagaaagacgatgtgaagcgtttggtcacccgccgtacgcgcgac
gtattggatcgtgcgctgaactccatcgcttccatctaccgagatgtggcggtgctgcag
aacaatgcggaggattcggtgggcctcatcaacctggagaaccgctcgtcgatcaccgaa
ttgtcggtgcgattgaaccgggccggtgccgtgacccgtctggacgaagtggcccacgcc
cgcaagcgcctagccggcaacggcaacccgctactggtattcgagtccctcttctgcgcc
ctgatctcataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (10)   
   Pfam (10)   
All databases (22)   

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