KEGG   Bifidobacterium longum subsp. longum F8: BIL_09470
Entry
BIL_09470         CDS       T02580                                 
Name
(GenBank) Holliday junction DNA helicase subunit RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
blg  Bifidobacterium longum subsp. longum F8
Pathway
blg03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:blg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    BIL_09470
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:blg03400]
    BIL_09470
Enzymes [BR:blg01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BIL_09470
DNA repair and recombination proteins [BR:blg03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     BIL_09470
    RecFOR pathway proteins
     BIL_09470
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 AAA_16 TIP49 AAA_22 AAA_14 Mg_chelatase nSTAND3 AAA_3 Zeta_toxin RNA_helicase AAA_18 NTPase_1 TsaE Sigma54_activ_2 AAA_25 NB-ARC AAA_33 IstB_IS21 AAA_17 AAA_19 POTRA_2 Rad17 NACHT AAA_24
Other DBs
NCBI-ProteinID: CBK70491
Position
1121633..1122697
AA seq 354 aa
MSETTDYGASNTGANEESLRMVSSQPIGNEPVSDEELRPHVLEGFIGQPRLKAQLQLFLD
AARKRDVPPDHILLAGPPGLGKTTLAMIVANELEVPIRVTSGPAVQHAGDLASILSSLDV
GEVLFIDEIHRLPRAAEELLYIAMEDFRVDVMVGKGPGASSIPLTLPRFTVIGATTREGM
LPSPLRARFGFTAHLDFYPHEELEKLIERSANVLGVNLDAGSAHELALRSRGTPRIANRL
LRRVRDWAIVHDLIVVRPDDVKEALALYQIDSEGLDRLDIAVLNAIVRNFNGGPVGLNNL
AAMVGEESETVETVCEPYLVREGFMIRTPKGRVATEKAWQHLGITPKDDVSKLF
NT seq 1065 nt   +upstreamnt  +downstreamnt
atgagcgagacaacggattacggagcctccaacaccggtgccaacgaagagtcgttgcgc
atggtctcctcccagccgatcggcaacgagccggtcagcgacgaggagctgcgcccccat
gttctcgaaggctttatcggacagccacggctcaaggcccagctgcaactgttcctggac
gcggcccgcaaacgcgatgtgccaccggaccatattctgcttgccggccctcctggcttg
ggcaaaaccacgttggccatgatcgttgccaatgagcttgaagtgccgattcgcgtgact
tccggccctgcggttcaacatgccggtgatcttgcttcgattctgagctccctcgacgtc
ggcgaagtgctgttcatcgacgagatccatcgtctgccgcgcgccgccgaagagctgctg
tatatcgcgatggaggacttccgcgtcgatgtgatggtcggcaaaggcccgggcgcaagc
tccatcccgctgaccctgccgcgattcaccgtcatcggtgccaccacgcgcgaaggtatg
ctgccaagcccgttgcgcgcacgctttggcttcaccgcacatctcgacttctatccgcat
gaggagttggaaaagctcatcgaacgttcggccaacgtactgggcgtaaaccttgatgcg
ggttccgctcatgagcttgcgttgcgttcgcgcggcacgccgcgtatcgccaaccgattg
ctacgccgtgtacgcgactgggccatcgtccacgacctgatcgtggtgcggccggacgac
gtcaaggaggcgctggccctgtaccagatcgactccgaaggcctcgaccggctggacatc
gccgtgctcaatgccatcgtgcgcaacttcaacggtggacccgtgggcctgaacaatctg
gcggccatggtgggcgaggaatcggaaaccgtggaaaccgtgtgcgagccgtatctcgtg
cgcgaaggttttatgattcgcacgcccaaaggccgcgtggctaccgagaaggcatggcag
catttgggaattacgcccaaagatgatgtcagcaagctcttctag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (28)   
   Pfam (28)   
All databases (37)   

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