KEGG   Bifidobacterium longum subsp. longum F8: BIL_16880
Entry
BIL_16880         CDS       T02580                                 
Name
(GenBank) Oligoribonuclease (3'->5' exoribonuclease)
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
blg  Bifidobacterium longum subsp. longum F8
Brite
KEGG Orthology (KO) [BR:blg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:blg03019]
    BIL_16880
   03009 Ribosome biogenesis [BR:blg03009]
    BIL_16880
Messenger RNA biogenesis [BR:blg03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     BIL_16880
Ribosome biogenesis [BR:blg03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    BIL_16880
SSDB
Motif
Pfam: RNase_T
Other DBs
NCBI-ProteinID: CBK71124
Position
complement(1950108..1950752)
AA seq 214 aa
MNTQHDITVSGKPLNPPKPPAKPHMLLWIDTETTGLDPNQCELLEVGMQVTDLKAETRGD
SLHLIVHPDNVRNWANHPEMLKAYEMHLANGLMLACAEAPKTGYDYKHTALNIHEFLNDQ
LSQYTLHPAGTNVDFDLRQLDVHLSRHLEHPITQGLHHRKLDLTSFRLADQAIGGNPYQN
HAGTHRVQDCIRRDINDYTAYLDIIRTGTQGDRQ
NT seq 645 nt   +upstreamnt  +downstreamnt
atgaacacccaacacgacatcaccgtcagcggcaaacccctcaacccgccaaaaccgcca
gccaaaccccacatgctcctatggatcgacaccgaaaccaccggcctcgaccccaatcag
tgcgaactcctggaagtcggcatgcaggtcaccgacctgaaagccgaaacccgaggcgac
agcctgcacctgatcgtccaccccgacaacgtgcgcaactgggccaaccaccccgaaatg
ctcaaagcctacgaaatgcacctcgccaacgggctcatgctcgcctgcgccgaagcaccc
aagaccggctacgactacaagcacaccgcgctcaacatccacgaattcctcaacgaccaa
ctcagccaatacacactccaccccgcaggaaccaacgtggacttcgacctgcgccagctc
gacgtgcacctcagccgccacctcgaacaccccatcacccaaggactccaccaccgaaaa
ctcgacctcaccagcttccgcctcgccgaccaagccatcggcggcaacccctaccaaaac
cacgcaggcacccaccgagtccaggactgcatccgtcgggacatcaacgactacaccgcc
tacctcgacatcatccgaaccggcacccaaggagacaggcaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (8)   

Download RDF
DBGET integrated database retrieval system