KEGG   Bacillus paralicheniformis: BaLi_c02200
Entry
BaLi_c02200       CDS       T02694                                 
Symbol
sigW
Name
(GenBank) RNA polymerase ECF-type sigma factor W
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
blh  Bacillus paralicheniformis
Brite
KEGG Orthology (KO) [BR:blh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:blh03021]
    BaLi_c02200 (sigW)
Transcription machinery [BR:blh03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BaLi_c02200 (sigW)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_r4 Sigma70_ECF HTH_16 HTH_28 HTH_24 HTH_Mga UPF0122 HTH_23
Other DBs
NCBI-ProteinID: AGN34636
Position
200660..201223
AA seq 187 aa
METMIKKRIKQVKKGDRNAFADIVDIYKDKIYQLCYRMLGNAHEAEDIAQEAFIRAYVNI
DSFDINRKFSTWLYRIATNLTIDRIRKKKPDYYLDAEVAGTEGLTMYSQVAADVALPEDE
VVSLELHSTIQEKILRLPDKYRTVIVLKYIDELSLIEISEILNIPVGTVKTRIHRGREAL
RKQLRDL
NT seq 564 nt   +upstreamnt  +downstreamnt
atggaaacaatgattaaaaaaagaatcaaacaggtgaaaaaaggcgatcgtaacgcattt
gcagacattgtggatatttacaaagacaaaatttatcagctttgctaccgtatgctcggc
aatgcgcatgaggcggaagatattgcgcaggaagcgtttatcagagcatacgtgaatatc
gacagttttgatatcaaccggaaattttccacatggctttatcgaatcgcaaccaatttg
accatcgatcgtatccgtaaaaaaaagccggactattacttggatgcagaggtggcgggg
actgaaggactgacgatgtattcccaggttgcggcggatgttgcgcttccagaggatgaa
gtggtttctttggagctgcacagcaccatccaggaaaaaatcttaaggcttcccgataaa
tacaggacggtcatcgtattaaagtacattgatgagctctcactcattgagatcagtgaa
atccttaatattcccgtaggtacggtaaaaacgaggatacacaggggcagagaggctctc
agaaaacaattaagggatctttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (10)   
   Pfam (10)   
All databases (16)   

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