KEGG   Bifidobacterium longum subsp. longum JDM301: BLJ_1044
Entry
BLJ_1044          CDS       T01240                                 
Name
(GenBank) Holliday junction DNA helicase RuvA
  KO
K03550  holliday junction DNA helicase RuvA
Organism
bll  Bifidobacterium longum subsp. longum JDM301
Pathway
bll03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bll00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    BLJ_1044
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bll03400]
    BLJ_1044
DNA repair and recombination proteins [BR:bll03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     BLJ_1044
    RecFOR pathway proteins
     BLJ_1044
SSDB
Motif
Pfam: RuvA_N HHH_5 RuvA_C HHH HHH_2 HupF_HypC RecR_HhH
Other DBs
NCBI-ProteinID: ADH00508
UniProt: D6ZUF2
Position
complement(1230638..1231264)
AA seq 208 aa
MIGMLTGRVESVETDTALIDVGGVGYEVRMSATDLSRLHAGQDTRVFTYMNLSQDAITLH
GFLDRDAKKTFLQLIKVSGIGPKVAQSLLSTLTPSQLAHAIADNDATALAKAPGLGKKGA
QKIILELKGSIDLSQIEGASAQAAISKSPVDTGTEQVVEGLISLGWRQQDAQQAVAEACA
ENDIPTPLATDDVPRVLRLALALMDRGR
NT seq 627 nt   +upstreamnt  +downstreamnt
atgatcggcatgctgaccgggcgggttgaatcggtcgaaaccgataccgcattgattgat
gttgggggagtgggctacgaagtgcgcatgtccgccaccgacctgagccgtctgcacgcc
gggcaagacacccgcgtcttcacctatatgaacctctctcaggatgccattaccctgcat
ggattcctggatcgggacgccaagaaaacctttctgcaactcatcaaggtctccggcatt
ggacctaaagtggcccaatcgttactctccacactgacgccgagtcagctggcccacgcc
atcgccgacaacgacgccaccgcgctggccaaggctccggggctgggcaagaagggcgca
cagaaaatcatcctcgagcttaagggctctattgatttgagtcagatcgagggtgcttcc
gctcaggcggcaatatccaagtctccggtggataccggtacggaacaggttgtcgaagga
ctgatttcacttggctggcgtcagcaggacgcccagcaggccgttgccgaggcttgcgcc
gaaaacgatattcccacgccgcttgccaccgacgatgtgccgcgtgtgctacgtctggct
ttggcgctgatggataggggccgctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (15)   

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