KEGG   Bifidobacterium animalis subsp. lactis Bi-07: W91_0423
Entry
W91_0423          CDS       T02080                                 
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
bls  Bifidobacterium animalis subsp. lactis Bi-07
Pathway
bls03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:bls00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    W91_0423
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bls03021]
    W91_0423
   03400 DNA repair and recombination proteins [BR:bls03400]
    W91_0423
Enzymes [BR:bls01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     W91_0423
Transcription machinery [BR:bls03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     W91_0423
DNA repair and recombination proteins [BR:bls03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      W91_0423
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L RAD51D_N
Other DBs
NCBI-ProteinID: AFJ17729
Position
482491..483486
AA seq 331 aa
MLIAQRPTLTEESLNPQRSRFIIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSVRISGAL
HEFTTLPGIEEDVTEILLNIKGIVLTSEYDEPVVMYLRKAGSGEATAGDITPPAGVTIAN
PDLHIATLAEDGELEIEFTVERGRGYVPAQMNKQDGDEIGRIPVDSIYSPVLKVSYKVEA
TRVEQRTDFDKLILDVETKPAISPRDAVASAGSTLVELFGLCRELNTQAEGVEIGPAPVA
EQADPGMSVPIEDLNLTQRSYNCLKREGIHTVGELVNHTEQDLLDIRNFGMKSIDEVKEK
LQSLGLSLKSSPLGFDTNNLEGGTFFSPEDE
NT seq 996 nt   +upstreamnt  +downstreamnt
gtgcttatcgcacagcgtccgacacttaccgaggaatcgctcaaccctcagcgttcccgt
ttcatcatcgagccgcttgagccgggtttcggctacacgcttggcaactcgcttcgccgt
actctgctcagctcgattccgggagcggcagtgacttcggtgcgtatttccggtgcgttg
catgagttcaccactctgccgggcatcgaggaagacgtcaccgagatcttgttgaacatc
aagggcatcgtgctcaccagcgaatacgatgagcctgtcgtgatgtatctgcgcaaggcg
ggcagcggcgaggccaccgcaggggacatcaccccaccggccggtgtcaccattgccaac
ccggatctgcacatcgccactctcgccgaagatggcgaacttgagatcgagttcaccgtc
gagcgtggccgcggatacgtcccagcccagatgaacaagcaggatggcgatgagattggc
cgcatcccggtcgattccatctactctccagtgctcaaggtgagctacaaggtcgaagcc
acccgtgttgaacagcgcaccgacttcgacaagctcattctggatgtggaaaccaagccg
gccatctccccgcgtgatgccgtcgcatccgcaggatccacgctggttgagctcttcggc
ctgtgccgtgaactcaacacgcaggccgagggtgtggaaatcgggccagccccggtggcc
gagcaggccgatccgggcatgtccgttccgatcgaggatctcaacctcacccagcgcagc
tacaactgcctgaagcgtgagggcatccacacggtcggcgagctggtgaaccacacggag
caggatctgctcgacatccgtaatttcggtatgaagtccattgacgaggtgaaggagaag
ctgcagtccctgggtctgtcgctcaagtcctcgccgctcggcttcgacaccaacaacctc
gaaggcggcaccttcttctcgccggaagacgagtaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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